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limma 2x2 factorial contrast.matrix
limma
weaver
limma
weaver
14.2 years ago
Ben Nota
▴ 10
0
votes
3
replies
1.0k
views
interaction term contrast in Weaver mutant example of LIMMA manual
limma
weaver
limma
weaver
updated 14.9 years ago by
James W. MacDonald
66k • written 14.9 years ago by
Erika Melissari
▴ 250
0
votes
0
replies
1.3k
views
subscript out of bounds halting error when Sweaving with weaver And GOstats' HyperGTest
GO
weaver
GO
weaver
15.8 years ago
Elliot Kleiman
▴ 150
0
votes
1
reply
2.1k
views
Limma user’s guide example data sets
Microarray
limma
limmaGUI
weaver
Microarray
limma
limmaGUI
weaver
updated 16.2 years ago by
Wang, Jixin
▴ 130 • written 16.2 years ago by
Keith Satterley
▴ 450
0
votes
0
replies
1.0k
views
Limma user’s guide example data sets
Microarray
limma
weaver
Microarray
limma
weaver
16.2 years ago
Wang, Jixin
▴ 130
0
votes
0
replies
924
views
Limma - using both array and spot weights in lmFit
Genetics
limma
weaver
Genetics
limma
weaver
17.2 years ago
Gordon Smyth
51k
0
votes
0
replies
875
views
Advice on how to compare two different sources on cDNA
limma
weaver
limma
weaver
17.5 years ago
Marcelo Laia
▴ 450
0
votes
1
reply
843
views
limma example Weaver Data
limma
weaver
limma
weaver
19.2 years ago
Gordon Smyth
51k
0
votes
3
replies
1.4k
views
limma example Weaver Data
limma
weaver
limma
weaver
updated 19.2 years ago by
Gordon Smyth
51k • written 19.2 years ago by
Wenbin Liu
▴ 100
0
votes
0
replies
993
views
Controls and duplicate correlation
limma
weaver
limma
weaver
19.2 years ago
lepalmer@notes.cc.sunysb.edu
▴ 40
0
votes
3
replies
1.3k
views
design in mixed ref and dye-swap experiment
limma
weaver
limma
weaver
updated 19.3 years ago by
Gordon Smyth
51k • written 19.4 years ago by
Silvano Piazza
▴ 50
0
votes
0
replies
2.4k
views
limma design matrix
GO
limma
PROcess
weaver
GO
limma
PROcess
weaver
20.4 years ago
Gordon Smyth
51k
0
votes
2
replies
1.1k
views
limma missing files
weaver
weaver
updated 21.2 years ago by
Gordon Smyth
51k • written 21.2 years ago by
Dick Beyer
★ 1.4k
13 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Lluís Revilla Sancho
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