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329
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DiffBind custom normalization factor
diffbind
updated 2.4 years ago by ★ 4.6k • written 3.0 years ago by ▴ 140
4
votes
5
replies
1.3k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling
updated 2.4 years ago by ★ 28k • written 3.6 years ago by ▴ 140
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0
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1.1k
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Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
2.5 years ago C T ▴ 140
7
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9
replies
1.1k
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counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
chippeakanno
updated 2.5 years ago by ★ 4.3k • written 2.6 years ago by ▴ 140
1
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0
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1.1k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
2.5 years ago C T ▴ 140
1
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1
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1.1k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
2.6 years ago C T ▴ 140
1
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1
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1.1k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
2.6 years ago C T ▴ 140
0
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0
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449
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Comment: C: how to suppress makeVennDiagram plot
2.6 years ago C T ▴ 140
2
votes
2
replies
449
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how to suppress makeVennDiagram plot
ChIPpeakAnno
2.6 years ago C T ▴ 140
1
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3
replies
638
views
csaw differential binding visualization
csaw
updated 3.0 years ago by ★ 28k • written 3.0 years ago by ▴ 140
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0
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1.8k
views
Comment: C: DiffBind for ATAC-seq -- bFullLibrarySize parameter
3.1 years ago C T ▴ 140
0
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1
reply
414
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Comment: C: how to draw multiple heatmap from GeneOverlap
3.1 years ago C T ▴ 140
0
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3
replies
414
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how to draw multiple heatmap from GeneOverlap
GeneOverlap multiple figures heatmap
updated 3.1 years ago by 62k • written 3.1 years ago by ▴ 140
0
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0
replies
1.2k
views
Comment: C: Error in creating BSGenome package
3.4 years ago C T ▴ 140
0
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1
reply
1.3k
views
Comment: C: emptyDrops identified less non-empty cells with lower total UMI counts?
3.6 years ago C T ▴ 140
0
votes
1
reply
870
views
Advice on correcting for batch effect using DESeq2
deseq2
updated 3.9 years ago by 39k • written 3.9 years ago by ▴ 140
0
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0
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2.0k
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Comment: C: Dispersion fit and p-value distributions
4.4 years ago C T ▴ 140
0
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0
replies
2.0k
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Comment: C: Dispersion fit and p-value distributions
4.4 years ago C T ▴ 140
7
votes
9
replies
2.0k
views
Dispersion fit and p-value distributions
deseq2 rnaseq fdrtool
updated 4.4 years ago by 7.8k • written 4.4 years ago by ▴ 140
0
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2
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2.0k
views
Comment: C: Dispersion fit and p-value distributions
4.4 years ago C T ▴ 140
0
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1
reply
2.7k
views
Comment: C: DESeq2 PCA plot on fitted values
4.8 years ago C T ▴ 140
0
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0
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2.7k
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Comment: C: DESeq2 PCA plot on fitted values
4.8 years ago C T ▴ 140
6
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5
replies
1.8k
views
reads alignment statistics
rsubread bioconductor
updated 5.5 years ago by 16k • written 5.5 years ago by ▴ 140
1
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0
replies
1.8k
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Comment: C: reads alignment statistics
5.5 years ago C T ▴ 140
0
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1
reply
1.8k
views
Comment: C: reads alignment statistics
5.5 years ago C T ▴ 140
0
votes
1
reply
1.7k
views
PCR bottleneck coefficient (PBC)
chipqc
updated 5.7 years ago by ★ 4.6k • written 5.7 years ago by ▴ 140
0
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1
reply
2.4k
views
Comment: C: Technical details of DiffBind correlation analysis
5.7 years ago C T ▴ 140
0
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0
replies
926
views
Comment: C: ChIPQC plotCoverageHist() and plotCC() not showing inputs
5.7 years ago C T ▴ 140
0
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0
replies
795
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Comment: C: ChIPQC plots for input samples
5.7 years ago C T ▴ 140
0
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2
replies
795
views
ChIPQC plots for input samples
chipqc
updated 5.7 years ago by ▴ 420 • written 5.7 years ago by ▴ 140
0
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3
replies
1.0k
views
ChIPQC reading more samples that it should
chipqc
5.7 years ago C T ▴ 140
0
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1
reply
1.0k
views
Answer: A: ChIPQC reading more samples that it should
5.7 years ago C T ▴ 140
0
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0
replies
1.8k
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Comment: C: ChIPseeker annotatePeak definition
6.5 years ago C T ▴ 140
0
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2
replies
1.8k
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ChIPseeker annotatePeak definition
chipseeker
updated 6.5 years ago by ★ 1.2k • written 6.5 years ago by ▴ 140
0
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0
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2.4k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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1
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2.4k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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0
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2.4k
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Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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0
replies
2.4k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
5
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15
replies
2.4k
views
nearest genes using TxDb.Hsapiens.UCSC.hg19
txdb.hsapiens.ucsc.hg19.knowngene ChIPpeakAnno
updated 6.8 years ago by ★ 4.3k • written 6.8 years ago by ▴ 140
0
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1
reply
2.4k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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0
replies
2.4k
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Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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1
reply
2.4k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
votes
2
replies
2.4k
views
Answer: A: nearest genes using TxDb.Hsapiens.UCSC.hg19
6.8 years ago C T ▴ 140
0
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0
replies
1.1k
views
get precursor mirna from mature mirna
bioconductor mirna mir mirbase.db
7.2 years ago C T ▴ 140
0
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0
replies
1.8k
views
Comment: C: mzR crashes R
10.0 years ago C T ▴ 140
0
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1
reply
1.8k
views
Comment: C: mzR crashes R
10.0 years ago C T ▴ 140
0
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1
reply
1.8k
views
Comment: C: mzR crashes R
10.0 years ago C T ▴ 140
0
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0
replies
1.2k
views
Comment: C: installing Rdisop
10.0 years ago C T ▴ 140
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