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0
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203
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bcftools norm Equivalent
Rsamtools
4 weeks ago Dario Strbenac ★ 1.6k
3
votes
2
replies
1.3k
views
Store Matrix in DataFrame Cell
S4Vectors
12 months ago Dario Strbenac ★ 1.6k
1
vote
1
reply
762
views
BiocNeighbours Utility for k-Nearest Neighbour Classification
Classification BiocNeighbors
updated 15 months ago by 68k • written 15 months ago by ★ 1.6k
1
vote
1
reply
765
views
DataFrame Character Truncation
S4Vectors
updated 16 months ago by 68k • written 16 months ago by ★ 1.6k
1
vote
1
reply
1.1k
views
Convert HGVS Representation back to Reference Genome Coordinates
GA4GHclient
updated 17 months ago by ▴ 160 • written 17 months ago by ★ 1.6k
2
votes
3
replies
1.0k
views
EBImage Rendering of a DelayedArray Object
DelayedArray EBImage cytomapper
updated 9 months ago by 16k • written 19 months ago by ★ 1.6k
1
vote
6
replies
1.5k
views
limma and Syntactically Invalid Factor Values
limma
updated 19 months ago by 53k • written 19 months ago by ★ 1.6k
0
votes
0
replies
551
views
Understanding Differentially Abundant Neighbourhood Identification
miloR
20 months ago Dario Strbenac ★ 1.6k
0
votes
0
replies
519
views
Structural Variant Format Converted for BRASS Format
StructuralVariantAnnotation
20 months ago Dario Strbenac ★ 1.6k
0
votes
0
replies
523
views
Differential Gene Wrapper for Propotion of Detected
scran
20 months ago Dario Strbenac ★ 1.6k
1
vote
1
reply
767
views
Dominance Index for Shotgun Metagenomics Data
microbiome
updated 22 months ago by ▴ 40 • written 22 months ago by ★ 1.6k
0
votes
0
replies
558
views
Exon-exon Junction Analysis for Variable-length Exons
Rsubread
22 months ago Dario Strbenac ★ 1.6k
2
votes
2
replies
1.1k
views
Bluster and Varieties of Louvain Clulstering
bluster
updated 23 months ago by ★ 5.0k • written 23 months ago by ★ 1.6k
2
votes
1
reply
1.1k
views
Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Comparison
scran bluster scater scuttle
updated 23 months ago by ★ 5.0k • written 23 months ago by ★ 1.6k
3
votes
3
replies
2.5k
views
plotUMAP Gene Set Faceted
scater
updated 2.1 years ago by ▴ 160 • written 2.1 years ago by ★ 1.6k
1
vote
1
reply
1.1k
views
plotUMAP and ggplotly Cell IDs Display
scater
updated 2.1 years ago by ▴ 160 • written 2.1 years ago by ★ 1.6k
0
votes
0
replies
472
views
iSEE Difference Panel Missing
iSEEu
2.1 years ago Dario Strbenac ★ 1.6k
0
votes
0
replies
670
views
clusterSweep Warning k Capped
bluster
2.1 years ago Dario Strbenac ★ 1.6k
4
votes
6
replies
1.7k
views
Merging of Human and Mouse SingleCellExperiment Objects Error
SingleCellExperiment
2.1 years ago Dario Strbenac ★ 1.6k
2
votes
1
reply
779
views
DataFrame Printing User Control
S4Vectors
updated 2.3 years ago by 16k • written 2.3 years ago by ★ 1.6k
3
votes
1
reply
1.2k
views
read10xCounts for Cell Ranger 7 Output
DropletUtils
updated 2.3 years ago by ★ 5.0k • written 3.4 years ago by ★ 1.6k
5
votes
6
replies
1.5k
views
DataFrame Construction With Non-standard Column
S4Vectors
updated 2.4 years ago by 16k • written 2.4 years ago by ★ 1.6k
2
votes
2
replies
2.4k
views
Matching Variants Between Two VCF Objects
VariantAnnotation
written 5.3 years ago by ★ 1.6k
0
votes
1
reply
1.2k
views
scRNAseq Download Errors
scRNAseq
updated 2.9 years ago by 4.3k • written 2.9 years ago by ★ 1.6k
4
votes
4
replies
2.8k
views
Flank GenomicRanges on Both Sides
GenomicRanges
updated 3.1 years ago by 68k • written 3.1 years ago by ★ 1.6k
2
votes
4
replies
1.4k
views
Successor of genesBy Defunct Function
ensembldb
updated 3.1 years ago by 16k • written 3.1 years ago by ★ 1.6k
3
votes
3
replies
1.4k
views
Subset and Assign MultiAssayExperiment
MultiAssayExperiment
updated 3.2 years ago by 700 • written 3.3 years ago by ★ 1.6k
2
votes
1
reply
1.2k
views
Generalised Variant Annotator for GRIDSS2
StructuralVariantAnnotation
updated 3.8 years ago by ▴ 40 • written 3.9 years ago by ★ 1.6k
2
votes
3
replies
2.0k
views
Accession ID Conversion and Missing Results
UniProt.ws
updated 4.6 years ago by 68k • written 4.6 years ago by ★ 1.6k
0
votes
0
replies
1.1k
views
Arithmetic Operations Between GRanges' Scores
GenomicRanges
4.7 years ago Dario Strbenac ★ 1.6k
0
votes
0
replies
797
views
plotCopyNumberCallsAsLines Examples have Messy Text Overplotting
CopyNumberPlots
4.7 years ago Dario Strbenac ★ 1.6k
3
votes
2
replies
6.6k
views
Convert DataFrame to data.frame While Keeping Column Name Syntax
S4Vectors
updated 4.7 years ago by 68k • written 4.7 years ago by ★ 1.6k
2
votes
1
reply
1.8k
views
DataFrame or DFrame
S4Vectors
updated 4.7 years ago by 700 • written 4.7 years ago by ★ 1.6k
2
votes
2
replies
1.7k
views
MutationalPatterns Signature Database Versions
MutationalPatterns
4.8 years ago Dario Strbenac ★ 1.6k
3
votes
1
reply
1.2k
views
MultiAssayExperiment sampleMap Requirement for All Assays
MultiAssayExperiment
updated 4.8 years ago by 700 • written 4.8 years ago by ★ 1.6k
0
votes
1
reply
1.1k
views
DegNorm Convergence Statuses
Convergence DegNorm
updated 4.8 years ago by ▴ 90 • written 4.8 years ago by ★ 1.6k
2
votes
1
reply
5.4k
views
Convert UniProt Entry Names into Gene Symbols
Proteomics ProteomicsWorkflow UniProt.ws
updated 5.1 years ago by 68k • written 5.1 years ago by ★ 1.6k
4
votes
1
reply
2.1k
views
Changing Row Names of MultiAssayExperiment Assay
MultiAssayExperiment
updated 5.3 years ago by ▴ 100 • written 5.3 years ago by ★ 1.6k
0
votes
0
replies
990
views
Expected Output for Promoters Used for GRangesList
GenomicRanges
5.6 years ago Dario Strbenac ★ 1.6k
2
votes
4
replies
2.4k
views
Obtaining Comments From VCF Header
VariantAnnotation VCFHeader
written 5.7 years ago by ★ 1.6k
3
votes
2
replies
2.1k
views
Import or Subset VCF PASS Variants
VariantAnnotation subset ScanVcfParam
updated 5.9 years ago by 25k • written 5.9 years ago by ★ 1.6k
2
votes
2
replies
1.1k
views
Recommended Read Support Filter for Breakends
StructuralVariantAnnotation
updated 6.4 years ago by ▴ 40 • written 6.4 years ago by ★ 1.6k
2
votes
3
replies
1.5k
views
Accounting for Gene Set Overlaps in Goana and Kegga Results
limma pathway
updated 6.5 years ago by ▴ 280 • written 6.5 years ago by ★ 1.6k
5
votes
11
replies
6.1k
views
Matching TCGA Aliquot ID to UUID or Barcode
TCGAutils TCGAbiolinks GenomicDataCommons
updated 6.6 years ago by 700 • written 6.6 years ago by ★ 1.6k
0
votes
3
replies
1.6k
views
rbind VCF Two Objects Column Names Error
VariantAnnotation VCF
6.7 years ago Dario Strbenac ★ 1.6k
4
votes
4
replies
2.0k
views
Mimic Counting of HTSeq-count Using countOverlaps
GenomicAlignments countOverlaps
updated 6.8 years ago by 25k • written 6.8 years ago by ★ 1.6k
3
votes
4
replies
1.7k
views
RNA-seq Statstical Models and Transcriptional Amplification
edgeR DESeq2 Transcriptional Amplification
updated 6.9 years ago by ★ 29k • written 6.9 years ago by ★ 1.6k
1
vote
4
replies
1.7k
views
qQCReport Missing Plots Described in Documentation
QuasR
updated 7.0 years ago by ▴ 400 • written 7.0 years ago by ★ 1.6k
6
votes
4
replies
12k
views
Converting UniProt Identifier Into Representative Gene Symbol
UniProt.ws
updated 3.2 years ago by 700 • written 7.5 years ago by ★ 1.6k
1
vote
1
reply
1.5k
views
Mean-Variance Plot for Normalised Counts
EDASeq meanVarPlot
updated 7.7 years ago by ▴ 980 • written 7.7 years ago by ★ 1.6k
119 results • Page 1 of 3
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