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0
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0
replies
1.6k
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QuasR for miRNA
miRNA
QuasR
miRNA
QuasR
11.6 years ago
Michael Stadler
▴ 350
0
votes
2
replies
1.5k
views
GViz Annotation Track Stacking
Gviz
Gviz
updated 11.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 11.6 years ago by
Lance Parsons
▴ 130
0
votes
1
reply
1.5k
views
Error when trying to normalize human Exon arrays (pd.huex.1.0.st.v2)
Normalization
Normalization
updated 11.6 years ago by
Benilton Carvalho
★ 4.3k • written 11.6 years ago by
Aaerp
▴ 40
0
votes
5
replies
2.9k
views
edgeR, logFC calculation in factor combination
RNASeq
edgeR
RNASeq
edgeR
updated 11.6 years ago by
Gordon Smyth
53k • written 11.6 years ago by
Mike Miller
▴ 70
0
votes
0
replies
2.0k
views
problems installing VariantFiltering package
VariantFiltering
VariantFiltering
11.6 years ago
Robert Castelo
★ 3.4k
0
votes
3
replies
1.6k
views
Normalising both Affy mogene 1.0 and 1.1 together
updated 11.6 years ago by
Stephen Piccolo
▴ 600 • written 11.6 years ago by
Joel Ma
▴ 50
0
votes
1
reply
3.6k
views
displaying coverage RNAseq Gviz
RNASeq
Coverage
Gviz
RNASeq
Coverage
Gviz
11.6 years ago
florian.hahne@novartis.com
★ 1.6k
0
votes
0
replies
987
views
GenomicFeatures::makeTranscriptDbFromUCSC broken?
GenomicFeatures
GenomicFeatures
11.6 years ago
Michael Lawrence
★ 11k
0
votes
2
replies
2.1k
views
mr.edgeR tests in MEDIPS package
Coverage
MEDIPS
Coverage
MEDIPS
updated 11.6 years ago by
Matthias Lienhard
▴ 280 • written 11.6 years ago by
Vining, Kelly
▴ 10
0
votes
6
replies
1.9k
views
a program to force fastq using pred+33 scoring system
updated 11.6 years ago by
Martin Morgan
25k • written 11.6 years ago by
wang peter
★ 2.0k
0
votes
0
replies
938
views
runFastHeinz - Bug
11.6 years ago
Guest User
★ 13k
0
votes
0
replies
1.8k
views
Help with aroma.light install
aroma.light
aroma.light
11.6 years ago
Luca Braglia
▴ 10
0
votes
1
reply
1.2k
views
Error using the id function of ShortReadQ object
updated 11.6 years ago by
Bernd Klaus
▴ 610 • written 11.6 years ago by
Guest User
★ 13k
0
votes
6
replies
2.0k
views
R-3.1.0: biocLite("vsn") removes all files in /
updated 11.6 years ago by
Dan Tenenbaum
★ 8.2k • written 11.6 years ago by
Guest User
★ 13k
0
votes
3
replies
1.9k
views
DESeqs two-factor two-level, interaction is interested
DESeq2
DESeq2
updated 11.6 years ago by
Michael Love
43k • written 11.6 years ago by
Guest User
★ 13k
0
votes
0
replies
1.4k
views
question about DiffBind
DiffBind
DiffBind
11.6 years ago
Rory Stark
★ 5.2k
0
votes
2
replies
1.6k
views
RNA-seq pathway analysis in Canis familiaris
RNASeq
Genetics
Annotation
Canis familiaris
gage
RNASeq
Genetics
Annotation
gage
updated 11.6 years ago by
James W. MacDonald
68k • written 11.6 years ago by
Jessica Perry Hekman
▴ 140
0
votes
0
replies
1.9k
views
mfuzz problems
Clustering
Mfuzz
Clustering
Mfuzz
11.6 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
2
replies
1.1k
views
readGAlignmentPairs perfromace issue
RNASeq
RNASeq
updated 11.6 years ago by
Valerie Obenchain
★ 6.8k • written 11.6 years ago by
Guest User
★ 13k
0
votes
1
reply
4.1k
views
Multi-sample VCF file and filterVcf
VariantAnnotation
Annotation
VariantAnnotation
VariantAnnotation
Annotation
VariantAnnotation
updated 11.6 years ago by
Valerie Obenchain
★ 6.8k • written 11.6 years ago by
Guest User
★ 13k
0
votes
6
replies
3.4k
views
Displaying very deep coverage in Gviz
Coverage
Gviz
Coverage
Gviz
updated 11.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 11.6 years ago by
Lance Parsons
▴ 130
0
votes
1
reply
1.2k
views
No access to bioconductor from a freshly installed R
updated 11.6 years ago by
Martin Morgan
25k • written 11.6 years ago by
Guest User
★ 13k
0
votes
0
replies
1.0k
views
Connectons-nous sur LinkedIn
11.6 years ago
Cherif Ben Hamda
▴ 150
0
votes
3
replies
1.2k
views
Error when loading biocLite.R via Rscript
updated 11.6 years ago by
Dan Tenenbaum
★ 8.2k • written 11.6 years ago by
David Eby
▴ 30
0
votes
1
reply
973
views
Question about DEXSeq, DESeq, and pasilla
DESeq
DEXSeq
DESeq
DEXSeq
updated 11.6 years ago by
Alejandro Reyes
★ 1.9k • written 11.6 years ago by
林宣佑
▴ 10
0
votes
1
reply
1.2k
views
error in loading a bioconductor package affy
affy
affy
updated 11.6 years ago by
James W. MacDonald
68k • written 11.6 years ago by
Guest User
★ 13k
0
votes
4
replies
2.1k
views
combat error message
miRNA
Normalization
affy
miRNA
Normalization
affy
updated 11.6 years ago by
Guest User
★ 13k • written 11.7 years ago by
W. Evan Johnson
▴ 870
0
votes
0
replies
1.2k
views
how to change pred+33 to pred+44 in shortread
11.6 years ago
wang peter
★ 2.0k
0
votes
5
replies
3.2k
views
limma: strange subsetting fit[, i] of "MArrayLM" object`s design matrix, also robust=TRUE and topTable
limma
limma
updated 11.6 years ago by
Panos Bolan
▴ 20 • written 11.6 years ago by
Maciek Sykulski
▴ 20
0
votes
10
replies
2.2k
views
DESeq on CCAT identified chipseq peaks
ChIPSeq
chipseq
DESeq
ChIPSeq
chipseq
DESeq
updated 11.6 years ago by
Rory Stark
★ 5.2k • written 11.6 years ago by
Guest User
★ 13k
0
votes
0
replies
1.5k
views
graphite biopax conversion code?
Pathways
graphite
Pathways
graphite
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
2
replies
4.6k
views
Limma design code with technical replicates, paired samples and two factors
updated 11.6 years ago by
Ryan C. Thompson
★ 7.9k • written 11.6 years ago by
Otto, Benjamin
▴ 20
0
votes
3
replies
1.3k
views
a possible bug in the shortread packge
updated 11.6 years ago by
Martin Morgan
25k • written 11.6 years ago by
wang peter
★ 2.0k
2
votes
1
reply
2.1k
views
smoothing function in bumphunter in minfi
minfi
bumphunter
minfi
bumphunter
updated 11.6 years ago by
Kasper Daniel Hansen
★ 6.5k • written 11.6 years ago by
Guest User
★ 13k
0
votes
0
replies
1.1k
views
How to get all transcripts
cummeRbund
cummeRbund
11.6 years ago
Guest User
★ 13k
0
votes
0
replies
1.4k
views
Course "CSAMA 2014" Computational Statistics for Genome Biology
Annotation
Classification
Clustering
Annotation
Classification
Clustering
11.6 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
2.0k
views
ComBat - stuck please help!
updated 11.6 years ago by
W. Evan Johnson
▴ 870 • written 11.6 years ago by
Siddiq, Afshan
▴ 10
2
votes
1
reply
2.4k
views
DEXSeq design formula
updated 11.6 years ago by
Alejandro Reyes
★ 1.9k • written 11.6 years ago by
Simone
▴ 190
1
vote
2
replies
14k
views
Mapping gene symbols to gene names (org.Hs.eg.db?)
convert
convert
updated 11.6 years ago by
James W. MacDonald
68k • written 11.6 years ago by
Tim Smith
★ 1.1k
0
votes
1
reply
1.5k
views
biomaRt mapping id RP5-1043L13.1
biomaRt
Vega
biomaRt
Vega
updated 11.6 years ago by
Thomas Maurel
▴ 800 • written 11.6 years ago by
Iain Gallagher
▴ 930
0
votes
1
reply
1.4k
views
oligo package - Unable to read HT-U133A CEL files
affy
oligo
affy
oligo
updated 11.6 years ago by
Benilton Carvalho
★ 4.3k • written 11.7 years ago by
Stephen Piccolo
▴ 600
0
votes
1
reply
1.2k
views
limma all by all
Microarray
limma
Microarray
limma
updated 11.6 years ago by
fire1976 wyoming
▴ 380 • written 11.6 years ago by
Gordon Smyth
53k
0
votes
3
replies
3.0k
views
featureCounts segfault
Annotation
BSgenome
BSgenome
Rsubread
Annotation
BSgenome
BSgenome
Rsubread
updated 11.6 years ago by
Wei Shi
★ 3.6k • written 11.7 years ago by
Ryan C. Thompson
★ 7.9k
0
votes
4
replies
2.2k
views
Paired comparisons in EdgeR
updated 11.6 years ago by
Jussi Salmi
▴ 10 • written 11.7 years ago by
Jussi Salmi
▴ 20
0
votes
1
reply
1.7k
views
pd.mirna.4.1
pdInfoBuilder
pdInfoBuilder
updated 11.6 years ago by
James W. MacDonald
68k • written 11.7 years ago by
Guest User
★ 13k
0
votes
1
reply
1.8k
views
Can GAGE be used for transcript set pathway analysis
Pathways
gage
Pathways
gage
updated 11.6 years ago by
Luo Weijun
★ 1.6k • written 11.7 years ago by
sun
▴ 100
0
votes
9
replies
2.6k
views
DESeq2 stuck running
cqn
DESeq2
cqn
DESeq2
updated 11.6 years ago by
Michael Love
43k • written 11.7 years ago by
Guest User
★ 13k
0
votes
8
replies
2.9k
views
gviz data track (heatmap) and title panel questions
updated 11.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 11.7 years ago by
Martin Rijlaarsdam
▴ 190
0
votes
3
replies
1.8k
views
New error in Gviz
Gviz
Gviz
updated 11.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 11.7 years ago by
Miles Pufall
▴ 40
0
votes
1
reply
793
views
Newcommers question on subsetting IRangesList
updated 11.6 years ago by
Michael Lawrence
★ 11k • written 11.6 years ago by
Guest User
★ 13k
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