0
votes
0
replies
1.5k
views
question regarding gviz
rtracklayer Gviz rtracklayer Gviz
13.0 years ago florian.hahne@novartis.com ★ 1.6k
0
votes
0
replies
2.4k
views
emacs org mode html export using jQuery DataTables (WAS: new package for generating interactive HTML reports)
Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR
13.0 years ago Malcolm Cook ★ 1.6k
0
votes
8
replies
3.0k
views
normalization of illumina bead array data
PROcess PROcess
updated 13.0 years ago by ▴ 90 • written 13.0 years ago by ★ 3.6k
0
votes
12
replies
3.1k
views
new package for generating interactive HTML reports
Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR
updated 13.0 years ago by ★ 1.6k • written 13.0 years ago by ▴ 20
0
votes
0
replies
1.1k
views
RNA Seq Profiling Experiment
edgeR edgeR
13.0 years ago empyrean999 ▴ 10
0
votes
8
replies
2.8k
views
vsn preprocess with oligo package
vsn oligo oligoClasses vsn oligo oligoClasses
updated 13.0 years ago by 68k • written 13.0 years ago by ▴ 110
0
votes
12
replies
3.0k
views
Pasilla data for "Counting with summarizeOverlaps/GenomicRanges"
updated 13.0 years ago by ★ 6.8k • written 13.0 years ago by ▴ 50
0
votes
4
replies
2.1k
views
Using GenomicRanges with table data
IRanges GenomicRanges IRanges GenomicRanges
updated 13.0 years ago by ★ 13k • written 13.0 years ago by ▴ 60
0
votes
5
replies
3.4k
views
parallel and GSVA
PROcess GSVA PROcess GSVA
updated 13.0 years ago by ★ 13k • written 13.0 years ago by ▴ 130
0
votes
1
reply
3.0k
views
edgeR continuous variables
edgeR edgeR
updated 13.0 years ago by ▴ 880 • written 13.0 years ago by ▴ 10
0
votes
0
replies
931
views
Stay in touch with me through LinkedIn
Network Network
13.0 years ago Shreyartha Mukherjee ▴ 80
0
votes
0
replies
874
views
Windows or Excel to R txt file
13.0 years ago boczniak767 ▴ 740
0
votes
4
replies
1.7k
views
xps: hugene11 chip gives problems
Microarray Annotation xps Microarray Annotation xps
updated 13.0 years ago by ★ 3.9k • written 13.0 years ago by ▴ 630
0
votes
0
replies
1.0k
views
Error installing iFlow (Jaques Fattaccioli)
Cancer iFlow BiocInstaller Cancer iFlow BiocInstaller
13.0 years ago Finak, Greg ▴ 40
0
votes
4
replies
1.6k
views
ggbio : misplaced tracks in a test case
updated 13.0 years ago by ▴ 420 • written 13.0 years ago by ▴ 410
0
votes
0
replies
1.2k
views
EdgeR Time Series Design leading to unequal replicates
13.0 years ago Marcelo ▴ 10
2
votes
3
replies
13k
views
subset GRanges
updated 13.0 years ago by ★ 13k • written 13.0 years ago by ▴ 100
0
votes
0
replies
1.0k
views
detailed analysis process of Comparisons Both Between and Within Subjects of edgeR
PROcess edgeR PROcess edgeR
13.0 years ago Gordon Smyth 53k
0
votes
4
replies
3.0k
views
minfi - how to subset a GenomicMethylSet by chromosome/seqname
Microarray Annotation PROcess minfi Microarray Annotation PROcess minfi
updated 13.0 years ago by ★ 4.2k • written 13.0 years ago by ▴ 30
0
votes
1
reply
1.3k
views
AffylmGUI freezes with recent updates of Windows 7 Enterprise Service Pack 1
Cancer affylmGUI Cancer affylmGUI
updated 13.0 years ago by ▴ 450 • written 13.0 years ago by ★ 2.0k
0
votes
3
replies
951
views
Nimblegen arrays; random probes
Normalization Normalization
updated 13.0 years ago by ▴ 30 • written 13.0 years ago by ▴ 20
0
votes
0
replies
963
views
Data analyst job at Novartis
13.0 years ago florian.hahne@novartis.com ★ 1.6k
0
votes
0
replies
1.2k
views
Conference Announcement - CAMDA 2013
Genetics Genetics
13.0 years ago CAMDA 2013 ▴ 30
0
votes
0
replies
1.1k
views
Using different file formats with oligo and analysis packages using oligo
SNP Microarray qPCR cycle SNP Microarray qPCR cycle
13.0 years ago Hans Thompson ▴ 30
0
votes
1
reply
1.6k
views
easyRNAseq remove overlapping features
Annotation BSgenome BSgenome IRanges easyRNASeq Annotation BSgenome BSgenome IRanges
updated 13.0 years ago by ★ 1.2k • written 13.0 years ago by ▴ 160
0
votes
4
replies
3.2k
views
Problems with 'affxparser' package
oligoClasses oligoClasses
13.0 years ago Valor Becerra, Luis Miguel ▴ 30
0
votes
0
replies
1.4k
views
We've posted our 2013***R Courses*** by XLSolutions Corp at 9 USA Cities: San Francisco, New York, Washington DC, Houston, Boston, Las Vegas, Seattle…
Clustering Clustering
13.0 years ago sue@xlsolutions-corp.com ▴ 570
0
votes
0
replies
1.0k
views
quick question : creating ideogram for a in-house genome
ideogram ideogram
13.0 years ago Abhishek Pratap ▴ 410
0
votes
0
replies
816
views
Bos taurus genome
Cancer BSgenome BSgenome Cancer BSgenome BSgenome
13.0 years ago Hervé Pagès 16k
0
votes
1
reply
1.4k
views
rtracklayer export method requires unique names
rtracklayer rtracklayer
updated 13.0 years ago by ★ 11k • written 13.0 years ago by ▴ 60
0
votes
2
replies
3.2k
views
biomaRt does not load archived Ensembl Genes database anymore.
GO biomaRt Vega GO biomaRt Vega
updated 13.0 years ago by ▴ 540 • written 13.0 years ago by ▴ 20
0
votes
2
replies
3.1k
views
Limma Voom R package
limma limma
updated 13.0 years ago by ★ 3.6k • written 13.0 years ago by ▴ 10
0
votes
6
replies
4.2k
views
topGO quick start guide error
topGO topGO
updated 13.0 years ago by 68k • written 13.0 years ago by ▴ 100
0
votes
2
replies
1.2k
views
Error installing iFlow
iFlow BiocInstaller iFlow BiocInstaller
updated 13.0 years ago by 68k • written 13.0 years ago by ▴ 10
0
votes
4
replies
1.2k
views
DESeq package error
DESeq DESeq
updated 13.0 years ago by ★ 8.2k • written 13.0 years ago by ▴ 30
0
votes
0
replies
664
views
reducing hits from countGenomicOverlaps()
Cancer Cancer
13.0 years ago Michael Lawrence ★ 11k
0
votes
0
replies
823
views
time series expression data
13.0 years ago Adrian Johnson ▴ 330
0
votes
4
replies
2.3k
views
GEOquery getGEO error in read.table
Microarray GEOquery Microarray GEOquery
updated 13.0 years ago by ▴ 160 • written 13.0 years ago by ▴ 210
0
votes
0
replies
1.5k
views
Bioinformatics Position Opening
Proteomics Infrastructure Proteomics Infrastructure
13.0 years ago Thomas Girke ★ 1.7k
0
votes
2
replies
3.1k
views
strategy to match/align peptide sequence to protein
updated 13.0 years ago by 16k • written 13.0 years ago by ▴ 360
0
votes
1
reply
695
views
detailed analysis process of \"Comparisons Both Between
updated 13.0 years ago by ★ 7.9k • written 13.0 years ago by ▴ 20
0
votes
2
replies
1.1k
views
detailed analysis process of \"Comparisons Both Between and Within Subjects\" of edgeR
edgeR edgeR
updated 13.0 years ago by ★ 7.9k • written 13.0 years ago by ★ 13k
0
votes
0
replies
1.1k
views
Post-doc position available
13.0 years ago rgentleman ★ 5.5k
0
votes
1
reply
1.4k
views
getting an error with ggbio
PROMISE PROMISE
13.0 years ago Abhishek Pratap ▴ 410
0
votes
3
replies
1.9k
views
help with visualizing structural variation data
ggbio ggbio
13.0 years ago Abhishek Pratap ▴ 410
0
votes
3
replies
1.4k
views
need help regarding quality assessment of raw data
arrayQualityMetrics arrayQualityMetrics
updated 13.0 years ago by ★ 13k • written 13.0 years ago by ▴ 20
0
votes
3
replies
1.4k
views
Double KO and timecourse design / limma
Microarray TimeCourse timecourse Microarray TimeCourse timecourse
updated 13.0 years ago by 53k • written 13.0 years ago by ▴ 160
0
votes
0
replies
1.2k
views
[methylumi] concerning methylumi.bgcorr function and out-of-band intensities
methylumi methylumi
13.0 years ago Dylan Aïssi ▴ 30
0
votes
3
replies
1.7k
views
Problem with biomaRt update in R-2.15.1
biomaRt biomaRt
updated 13.0 years ago by 68k • written 13.0 years ago by ★ 13k
0
votes
1
reply
1.0k
views
Problem in KEGGSOAP package
KEGGSOAP KEGGSOAP
updated 13.0 years ago by ★ 8.2k • written 13.0 years ago by ▴ 120
46,699 results • Page 558 of 934
Recent ...
Replies
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ATpoint ★ 5.0k
> and I first used the normalized counts You would not use these normalized counts for PCA as they're not on log2 scale. As such, the feat…
Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Comment: DESeq2 on non-RNASeq counts data by TikTsokaasocissalpc • 0
In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…
Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards • All
Popular Question to Gordon Smyth 53k
Popular Question to Vincent J. Carey, Jr. 6.7k
Popular Question to Istvan Albert ▴ 50
Popular Question to Dario Strbenac ★ 1.6k
Scholar to Nikos Ignatiadis ▴ 180
Locations • All
United States, 1 hour ago
Ireland, 2 hours ago
United States, 2 hours ago
United States, 4 hours ago
United States, 4 hours ago
Traffic: 1010 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6