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Bioconductor Long-term Contribution Award
Bioc2023
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12 months ago
shepherl
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13 months ago • updated 12 months ago
shepherl
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course - single-cell RNAseq data analysis with R and Bioconductor
Workshop
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BioC2023 abstract submission is now open!
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written 15 months ago by
Maria Doyle
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Join the Community Advisory Board -- upcoming elections -- deadline Today
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written 17 months ago by
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Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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written 18 months ago by
Peter Hickey
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News:
Nominations for Bioconductor 2022 Awards!
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written 2.2 years ago by
shepherl
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[Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
biorxiv
spatialLIBD
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written 4.2 years ago by
Leonardo Collado Torres
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Bioinformatics Summer School - July 2019 - UCLouvain (Belgium)
RNAseq
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written 5.2 years ago by
Laurent Gatto
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Final List of Deprecated Packages for Bioc3.7
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written 6.1 years ago by
shepherl
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Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Comment: maSigPro genes from clusters
by
anne-laure
• 0
Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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