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Job: Postdoctoral Position in Bioinformatics to study Gene Regulatory Networks (University of Basel, Basel, Switzerland)
PostDoc JobPosting Basel Switzerland
3.8 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Core Facility (100%)
JobPosting Job Switzerland Basel
updated 6 weeks ago by • 0 • written 4.5 years ago by ▴ 750
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Job: Computational biology of cancer (Postdoc Position)
JobPosting Basel Switzerland
4.7 years ago Robert Ivanek ▴ 750
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Job: Data Scientist Proteomics (100%), Biozentrum, University of Basel, Switzerland
Switzerland JobPosting Basel Proteomics
4.8 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Experimental Cancer Research (80-100%)
Switzerland Bioconductor Basel job
4.8 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Fellow in Genomics (University of Basel, Switzerland)
PostDoc Basel Switzerland Job
6.4 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Position: Posttranscriptional gene regulation in T cells (analysis of RNAseq, metabolomics)
Basel switzerland RNAseq metabolomics Job
7.4 years ago Robert Ivanek ▴ 750
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Comment: WGCNA analysis on RNAseq and proteoimcs data by sum31278 • 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning by inadequate.peacock.iiag • 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design by Gordon Smyth 52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
Answer: ROAST compare results with complex design by James W. MacDonald 68k
You are specifying that the last column of your design should be used as the contrast. You should instead use `contrast[,1]`, which will us…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by James W. MacDonald 68k
Yes. You can infer that by figuring out what each coefficient measures. Here is your design matrix: ``` > targets ID Name phase G…
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Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
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