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Big Data
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1.5k
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Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
NGS
R
statistics
genomics
big data
Job
5.9 years ago • updated 5.1 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.0k
views
Job:
Data Manager - BC Cancer Research Center, Vancouver BC
computational
genomic
big data
bioinformatics
Job
5.6 years ago
jmaanaki
• 0
0
votes
0
replies
1.1k
views
Job:
Postdoctoral positions in drug discovery and genome data science
computational biology
biostatistics
big data
data science
drug discovery
Job
5.9 years ago
Thomas Girke
★ 1.7k
1
vote
2
replies
1.1k
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How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 6.3 years ago by
Martin Morgan
25k • written 6.3 years ago by
perdedorium
• 0
1
vote
1
reply
1.4k
views
Subsetting Rle with ORF-sequence-positions by the 3 frames
Rle
Big data
coverageByTranscript
6.7 years ago
hauken_heyken
▴ 80
0
votes
0
replies
1.5k
views
What is the recommended method for running WGCNA on large metatranscriptomic dataset?
wgcna
transcriptome
big data
metagenomics
gene expression
6.9 years ago
jol.espinoz
▴ 40
3
votes
1
reply
1.5k
views
AnnotationHub: confusing pValue/qValue for (some) Roadmap records
roadmap project
annotationhub
epigenomics
big data
updated 8.7 years ago by
Valerie Obenchain
★ 6.8k • written 8.7 years ago by
kevin.rue
▴ 350
0
votes
0
replies
2.3k
views
Job:
Postdoctoral Research Associate Position- Harvard Medical School (Probabilistic Algorithms and Software for Biomedical Big Data)
Probabilistic Algorithms
Big Data
Job
9.7 years ago
Doe, Aimee
▴ 40
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Comment: Incorporating Salmon offset matrix into Wilcoxon DEG analysis
by
Andre
• 0
Thank you. What is the difference between setting robust=TRUE in glmQLFit and estimateGLMRobustDisp? The paper i mentioned in the post used…
Comment: PCA of different bacterial species
by
Jeremy
• 0
Your approach of using ~2500 single-copy orthologs and normalizing with VST or rlog for PCA is valid for exploring general clustering [pap…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
pheno <- rnb.set.arrays@pheno # Phenotypic data sites <- rnb.set.arrays@sites # CpG site definitions (data.frame) meth <- rnb.set…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
![enter image description here][1] [1]: /media/images/40d9778d-b044-4405-9b3d-2ba835f6 Hi, after I convert to RnBiseqSet, it shows "All…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
rnb.set.biseq <- RnBiseqSet( pheno = pheno, sites = sites, meth = meth, covg = NULL, # This can be NULL if coverage …
Votes
Answer: Incorporating Salmon offset matrix into Wilcoxon DEG analysis
scater/scran with TPMs from Salmon - counts?
A: Full length single-cell RNA-seq - tximport output for downstream analysis
Answer: Understanding tximport working with salmon outputs
Answer: enrichGOgradient color change
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