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CATALYST
•
reset
0
votes
0
replies
297
views
Catalyst::cluster function does NOT produce the same results when setting seed
visua
Visualization
CATALYST
7 months ago
elefth.pavlos
▴ 40
0
votes
2
replies
723
views
Invalid spillover matrix with values greater than 1
CATALYST
updated 12 months ago by
SamGG
▴ 350 • written 23 months ago by
David
• 0
2
votes
3
replies
2.6k
views
Keep getting this error "Warning: unable to access index for repository"?
CATALYST
updated 14 months ago by
Hervé Pagès
16k • written 14 months ago by
Hyoann
▴ 20
0
votes
0
replies
463
views
data truncation with sce2fcs()
CATALYST
16 months ago
Shaun
• 0
2
votes
2
replies
1.2k
views
Unable to download CATALYST
CATALYST
2.0 years ago
David
• 0
1
vote
3
replies
1.1k
views
singlecellexperiments markers after clustering
CATALYST
SingleCellExperiment
updated 3.6 years ago by
helucro
▴ 70 • written 3.6 years ago by
achaillon
• 0
2
votes
2
replies
1.5k
views
Updating package CATALYST
CATALYST
cytofWorkflow
updated 4.7 years ago by
Martin Morgan
25k • written 4.7 years ago by
Brent.OCarrigan
• 0
0
votes
1
reply
1.1k
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
5.5 years ago
j.krop
• 0
8 results • Page
1 of 1
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Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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