Showing : CATALYST • reset
2
votes
2
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1.4k
views
Updating package CATALYST
CATALYST cytofWorkflow
updated 4.4 years ago by 25k • written 4.4 years ago by • 0
2
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3
replies
2.1k
views
Keep getting this error "Warning: unable to access index for repository"?
CATALYST
updated 11 months ago by 16k • written 11 months ago by ▴ 20
2
votes
2
replies
1.1k
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Unable to download CATALYST
CATALYST
21 months ago David • 0
1
vote
3
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1.0k
views
singlecellexperiments markers after clustering
CATALYST SingleCellExperiment
updated 3.4 years ago by ▴ 70 • written 3.4 years ago by • 0
0
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0
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220
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Catalyst::cluster function does NOT produce the same results when setting seed
visua Visualization CATALYST
4 months ago elefth.pavlos ▴ 40
0
votes
2
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621
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Invalid spillover matrix with values greater than 1
CATALYST
updated 9 months ago by ▴ 350 • written 20 months ago by • 0
0
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0
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397
views
data truncation with sce2fcs()
CATALYST
13 months ago Shaun • 0
0
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1
reply
972
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Error after assignPrelim(), CyTOF compenstation
CATALYST flowCore assignPrelim Error in vapply read.FCS
5.2 years ago j.krop • 0
8 results • Page 1 of 1
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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