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CEL
•
reset
0
votes
2
replies
2.5k
views
Problems opening cel files
cel
8.2 years ago
ranjita_duttaroy
• 0
0
votes
3
replies
2.4k
views
view .CEL file- in both windows and ubuntu
cel
.cel fiels
7.1 years ago
farahqureshi5
• 0
3
votes
1
reply
2.3k
views
Processing RAW CEL files from GEO
CEL
RAW
geoquery
readaffy
updated 9.5 years ago by
Sean Davis
21k • written 9.5 years ago by
PyPer
▴ 20
0
votes
1
reply
2.0k
views
how to get tissue name of cel files?
pca
oligo
cel
updated 8.8 years ago by
Gabriel Nathan Kaufman, Mr
▴ 60 • written 8.8 years ago by
angel.ruvalkba
• 0
0
votes
2
replies
2.0k
views
CEL to Cibersort mix files, fails find Affymatrix specs
affy
cel
8.4 years ago
thrabe
• 0
0
votes
2
replies
1.9k
views
Reading CEL files using Oligo and pd.hta.2.0 packages in Windows 7
oligo
pd.hta.2.0
CEL
R
windows 7
6.7 years ago
ladhikari
• 0
0
votes
5
replies
1.9k
views
collect an expression dataset
limma
CEL
GEO
affydata
expresiondataset
updated 8.4 years ago by
Robert Castelo
★ 3.3k • written 8.4 years ago by
libya.tahani
• 0
1
vote
3
replies
1.4k
views
Reading CEL files
cel
affy
updated 7.6 years ago by
James W. MacDonald
65k • written 7.6 years ago by
libya.tahani
• 0
1
vote
2
replies
1.3k
views
Rstudio session aborts when using read.celfiles()
oligo package
Rstudio
fatal error
microarray
CEL
6.4 years ago
biostR
▴ 10
0
votes
0
replies
1.1k
views
Interpreting Affymetrix Human Genome U133 Plus 2.0 samples
gene expression
gene expression data
cel
affy
affymatrix
6.2 years ago
torgeirous
• 0
0
votes
2
replies
984
views
How to process triplicate cel data?
microarray
affy
cel
drugmatrix
updated 3.9 years ago by
Gordon Smyth
50k • written 3.9 years ago by
peirinl
• 0
0
votes
3
replies
689
views
Input files for Affymetrix platform
Affymetrix
CEL
TXT
updated 4.4 years ago by
James W. MacDonald
65k • written 4.4 years ago by
pbachali
▴ 50
12 results • Page
1 of 1
Recent ...
Replies
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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