Showing : Cheminformatics • reset
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Comparing compounds in CheminneR
Cheminformatics ChemmineR ChemmineDrugs
2.5 years ago Sean • 0
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1
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1.4k
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ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf ChemmineOB Cheminformatics ChemmineR
4.5 years ago adelenelai • 0
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Where can I locate the bioassayR database?
bioassayr chemmineR cheminformatics
6.9 years ago Anthony Nash ▴ 20
3
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1
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1.1k
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Can limma/other DE algorithms be used for differential analysis of chemical descriptors?
limma edger deseq2 cheminformatics
updated 7.4 years ago by ★ 29k • written 7.4 years ago by • 0
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1.7k
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cellHTS2 importa and analysing data from chemical compound screening
cellhts2 cheminformatics
updated 9.2 years ago by ▴ 160 • written 9.2 years ago by ▴ 810
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3
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2.4k
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Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 9.7 years ago by ▴ 10 • written 9.7 years ago by • 0
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BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi
12.6 years ago Martin Morgan 25k
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'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics Cheminformatics Visualization xcms Metabolomics Cheminformatics Visualization
15.9 years ago Gabriella Rustici ▴ 60
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1.1k
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
17.6 years ago Thomas Girke ★ 1.7k
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1.2k
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
18.4 years ago Thomas Girke ★ 1.7k
10 results • Page 1 of 1
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Comment: Bile acid analysis with limpa by ATpoint ★ 5.0k
Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
Comment: chemmineOB install help by Jeremy • 0
I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k
The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0
Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k
Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…
Votes
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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