Showing : Cheminformatics • reset
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Comparing compounds in CheminneR
Cheminformatics ChemmineR ChemmineDrugs
2.3 years ago Sean • 0
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1
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1.3k
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ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf ChemmineOB Cheminformatics ChemmineR
4.3 years ago adelenelai • 0
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Where can I locate the bioassayR database?
bioassayr chemmineR cheminformatics
6.7 years ago Anthony Nash ▴ 20
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Can limma/other DE algorithms be used for differential analysis of chemical descriptors?
limma edger deseq2 cheminformatics
updated 7.3 years ago by ★ 29k • written 7.3 years ago by • 0
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cellHTS2 importa and analysing data from chemical compound screening
cellhts2 cheminformatics
updated 9.0 years ago by ▴ 160 • written 9.0 years ago by ▴ 810
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Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 9.5 years ago by ▴ 10 • written 9.5 years ago by • 0
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BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi
12.4 years ago Martin Morgan 25k
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'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics Cheminformatics Visualization xcms Metabolomics Cheminformatics Visualization
15.8 years ago Gabriella Rustici ▴ 60
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
17.4 years ago Thomas Girke ★ 1.7k
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
18.2 years ago Thomas Girke ★ 1.7k
10 results • Page 1 of 1
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Comment: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR by efoss ▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma by Gordon Smyth 53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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