Bioconductor DESeqDataSetFromMatrix

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deseq2 rnaseq featurecounts DESeqDataSetFromMatrix

updated 6.4 years ago by Michael Love 41k • written 6.5 years ago by bioinf ▴ 10

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help DESeq2 DESeqDataSetFromMatrix rownames

updated 22 months ago by Sanatan • 0 • written 3.0 years ago by dorina.jamniczky • 0

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DESeqDataSet DESeqDataSetFromMatrix rnaseq deseq2

7.8 years ago ErickF ▴ 40

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rangedsummarizedexperiment deseqdatasetfrommatrix deseq2 tximport

6.6 years ago lirongrossmann ▴ 80

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deseq2 DESeqDataSetFromMatrix software error

updated 5.9 years ago by Michael Love 41k • written 5.9 years ago by nazaninhoseinkhan • 0

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DESeqDataSetFromMatrix

2.9 years ago Gian ▴ 30

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deseq2 replicates error DESeqDataSetFromMatrix

updated 5.1 years ago by Michael Love 41k • written 5.1 years ago by Yonatan Amzaleg • 0

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deseq2 deseqdatasetfrommatrix rnaseq affy

updated 5.4 years ago by Michael Love 41k • written 5.4 years ago by matthew.sinton • 0

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deseq2 DESeqDataSetFromMatrix

updated 6.8 years ago by Michael Love 41k • written 6.8 years ago by zxy5139 • 0

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deseq2 DESeqDataSetFromMatrix duplicate

updated 6.1 years ago by James W. MacDonald 65k • written 6.1 years ago by Assa Yeroslaviz ★ 1.5k

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DESeq2 deseqdatasetfrommatrix r new version

updated 5.7 years ago by Michael Love 41k • written 5.7 years ago by megannj • 0

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deseq2 deseqdatasetfrommatrix deseqdataset

updated 6.4 years ago by Michael Love 41k • written 6.4 years ago by jillian.waters • 0

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DESeqDataSetFromMatrix dds DESeq2

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by naomi.croft • 0

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

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