Bioconductor EPICv2

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345

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limma DMRcate MethylationArray EPICV2

updated 5 days ago by Gordon Smyth 50k • written 5 days ago by Kim • 0

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267

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DNAMethylation GO MethylationArray missMethyl EPICv2

updated 9 weeks ago by belinda.phipson ▴ 40 • written 9 weeks ago by s.malik • 0

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447

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 11 weeks ago by James W. MacDonald 65k • written 11 weeks ago by rae.alshammari ▴ 10

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681

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ChAMP EPICv2

updated 3 months ago by shuo • 0 • written 3 months ago by ChunkyJones • 0

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789

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sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2

updated 6 weeks ago by aldea85 • 0 • written 5 months ago by Courtney • 0

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1.6k

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minfiDataEPIC EpicV2

updated 7 months ago by Zuguang Gu ▴ 260 • written 8 months ago by Izabela.ams • 0

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1.8k

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ChAMP EPICv2

updated 21 days ago by shilpa • 0 • written 10 months ago by medha.suman • 0

7 results • Page 1 of 1

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Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k