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GOslim
•
reset
0
votes
8
replies
1.4k
views
GOslim missing GO term
GO.db
GOslim
16 months ago
amanda
• 0
3
votes
4
replies
2.5k
views
GSEABase - Map gene/transcript IDs to GOslims?
gseabase
go
gene ontology
goslim
5.1 years ago • updated 2.1 years ago
samwhite
▴ 20
7
votes
9
replies
4.5k
views
GSEABase - View/extract GO terms mapped to each GOslim
go
GSEABase
GOslim
gene ontology
5.1 years ago • updated 2.0 years ago
samwhite
▴ 20
0
votes
2
replies
2.0k
views
Resolved- GSEAbase: goSlim function, pb with counts
GSEA
GO
goSlim
7.5 years ago
maeva.mollion
• 0
1
vote
1
reply
1.5k
views
Obtaining Go slim terms from biomaRt
biomaRt
goslim
go
updated 8.4 years ago by
Mike Smith
★ 6.6k • written 8.4 years ago by
rubi
▴ 110
0
votes
0
replies
1.5k
views
Create list of genes within each GOslim term
gene ontology
goslim
enrichment analysis
gene annotation
9.0 years ago
mirko
• 0
6 results • Page
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Answer: DESeq2
by
ATpoint
★ 4.8k
Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …
Comment: Package developing and interoperation with Bioconductor
by
slizchap
• 0
Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.
Comment: Package developing and interoperation with Bioconductor
by
slizchap
• 0
Thank you so much for your answer, very useful!
Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
by
Mike Smith
★ 6.6k
Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…
Answer: Mismatch between Illumina Mouse Methylation BeadChip annotation and genome brows
by
James W. MacDonald
68k
The annotation data that is provided for this array is simply a repackaging of data that we get from Illumina, so any apparent inconsistenc…
Votes
Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?
Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin
Comment: ComBat with repeated measures
Answer: Package developing and interoperation with Bioconductor
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
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