Bioconductor IsoformSwitchAnalyzeR

Showing : IsoformSwitchAnalyzeR • reset

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isoformswitchanalyzeR rna-seq splice-variants

written 5.1 years ago by saddamhusain77 • 0

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AlternativeSplicing RNASeq IsoformSwitchAnalyzeR gtf

written 21 months ago by bpshtiwan ▴ 10

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isoformswitchanalyzer isoform differential isoform usage

written 5.4 years ago by A ▴ 40

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dplyr IsoformSwitchAnalyzeR

written 12 months ago by ramon.dslps • 0

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salmon IsoformSwitchAnalyzeR tximport RNASeqData

updated 9 months ago by k.vitting.seerup ▴ 120 • written 9 months ago by elva.gypsophila ▴ 10

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IsoformSwitchAnalyzeR

10 months ago venura • 0

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IsoformSwitchAnalyzeR

11 months ago Callum • 0

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112

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DESeq2 LongRead DEXSeq IsoformSwitchAnalyzeR RNASeq

updated 17 days ago by Michael Love 41k • written 17 days ago by 09191919 • 0

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311

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IsoformSwitchAnalyzeR satuRn

7 months ago jbono ▴ 10

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376

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Isoform IsoformSwitchAnalyzeR

11 months ago Craig • 0

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156

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IsoformSwitchAnalyzeR

8 weeks ago Henry • 0

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283

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stringtie IsoformSwitchAnalyzeR pfamAnalyzeR gtf

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by sumitra.20 • 0

12 results • Page 1 of 1

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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0

Intent to delete when going home. Sorry for that!

Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k

Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0

Thanks Gordon for the advice!

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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

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