Bioconductor KEGG

Showing : KEGG • reset

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434

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clusterProfiler GenomicDistributionsData KEGG

16 days ago • updated 13 days ago fernanda.backsouza ▴ 10

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2.6k

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KEGG gometh

updated 11 months ago by Aung • 0 • written 14 months ago by pedro-marra ▴ 10

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2.0k

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KEGG clusterProfiler

updated 4 months ago by Guido Hooiveld ★ 3.9k • written 14 months ago by ruiqi.li ▴ 10

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1.2k

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KEGG limma

written 13 months ago by andrewsm • 0

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1.3k

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cluster clusterProfiler KEGG

12 months ago ruba-mahmoud • 0

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pathview KEGG Oryza_sativa

10 months ago Jiyoung Lee • 0

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1.9k

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clusterProfiler enrichment KEGG

updated 11 weeks ago by cinzia.spagnoli • 0 • written 23 months ago by AP • 0

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1.2k

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pathview kegg KEGG

updated 7 months ago by Benji Bromberg ▴ 20 • written 7 months ago by Mauricio Diego • 0

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1.1k

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KEGG DESeq2 biomaRt clusterProfiler org.Mm.eg.db

updated 8 months ago by Guido Hooiveld ★ 3.9k • written 8 months ago by Milan ▴ 10

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199

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Pathways clusterProfiler gseKEGG KEGG

26 days ago • updated 25 days ago julia_mcdonough • 0

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217

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KEGGREST GenomicDistributionsData KEGGgraph KEGG

updated 16 days ago by Guido Hooiveld ★ 3.9k • written 18 days ago by fernanda.backsouza ▴ 10

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266

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enrichKEGG KEGGgraph KEGG

updated 11 weeks ago by Guido Hooiveld ★ 3.9k • written 11 weeks ago by cinzia.spagnoli • 0

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1.4k

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KEGG GAGE NaN R DESeq2

updated 12 months ago by Rob • 0 • written 5.5 years ago by owen.donohoe • 0

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1.5k

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kegg enrichkegg clusterprofiler

updated 5 months ago by EvaLan • 0 • written 5.8 years ago by bekah ▴ 40

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565

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timecourse KEGG DESeq2

updated 11 months ago by Michael Love 42k • written 11 months ago by Fred • 0

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117

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KEGGgraph org.Cs.eg.db clusterProfiler KEGG AnnotationHubSoftware

updated 14 days ago by James W. MacDonald 65k • written 14 days ago by fernanda.backsouza ▴ 10

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354

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axolotl KEGG GOstats clusterProfiler

9 months ago georgii.vdovin • 0

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360

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KEGGREST KEGG RNASeq

6 months ago mch • 0

18 results • Page 1 of 1

Recent ...

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Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.

Comment: Extremely small p-values using Limma for proteomic data by Robert Castelo ★ 3.3k

From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …

Comment: deseq2 results by ATpoint ★ 4.1k

> the results are not satisfactory to me Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…

Comment: Extremely small p-values using Limma for proteomic data by ATpoint ★ 4.1k

It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …

Votes

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

Answer: Cannot connect to ExperimentHub server

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Popular Question to DevelopingHippo • 0

Scholar to Robert Castelo ★ 3.3k

Popular Question to Gyan Prakash Mishra ▴ 10