Bioconductor MAPLOT

Showing : MAPLOT • reset

votes

replies

1.1k

views

DESeq2 MAplot

updated 16 months ago by ATpoint ★ 4.2k • written 16 months ago by Michael • 0

votes

replies

2.3k

views

MAplot

16 months ago Nathalie ▴ 20

votes

replies

2.5k

views

DESeq2 MAplot deseq

updated 3.3 years ago by Michael Love 42k • written 3.3 years ago by sp • 0

vote

803

views

deseq2 MAplot lfcshrink

updated 3.8 years ago by Michael Love 42k • written 3.8 years ago by evelas13 • 0

vote

replies

610

views

deseq2 maplot annotation

updated 4.6 years ago by Michael Love 42k • written 4.6 years ago by rbronste ▴ 60

votes

replies

2.6k

views

diffbind R MAplot Chipseq

updated 5.1 years ago by Rory Stark ★ 5.2k • written 5.1 years ago by melnuesch ▴ 10

votes

replies

1.4k

views

deseq2 MAplot

5.6 years ago avitalwasser • 0

votes

replies

1.3k

views

deseq2 maplot

updated 5.6 years ago by James W. MacDonald 66k • written 5.6 years ago by rbronste ▴ 60

votes

replies

1.1k

views

deseq2 normalization maplot rnaseq

updated 5.6 years ago by Michael Love 42k • written 5.6 years ago by ma619 • 0

votes

1.6k

views

MAPLOT DESEQ2 RNASEQ

updated 6.4 years ago by Michael Love 42k • written 6.4 years ago by phurbusang • 0

votes

2.1k

views

deseq2 maplot subset

updated 6.4 years ago by Michael Love 42k • written 6.4 years ago by rbronste ▴ 60

votes

replies

1.6k

views

diffbind maplot

updated 6.4 years ago by Rory Stark ★ 5.2k • written 6.4 years ago by grundelphine • 0

vote

replies

1.3k

views

diffbind deseq2 maplot

updated 6.7 years ago by Rory Stark ★ 5.2k • written 6.7 years ago by rbronste ▴ 60

votes

replies

2.7k

views

deseq2 maplot

updated 6.7 years ago by Michael Love 42k • written 6.7 years ago by jshouse ▴ 10

votes

replies

1.9k

views

edgeR MAplot rnaseq differential gene expression

updated 7.8 years ago by Gordon Smyth 51k • written 7.8 years ago by joseph.bergenstrahle • 0

votes

replies

1.2k

views

MAplot rnaseq cummerbund

8.2 years ago kritikamish99 ▴ 10

16 results • Page 1 of 1

Recent ...

Replies

Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0

Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…

Comment: Trouble reading samplesheet in with diffbind to create dba by Mallory • 0

Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …

Answer: Trouble reading samplesheet in with diffbind to create dba by Anthony • 0

I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …

Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100

Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz

Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k

The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …

Votes

A: dream vignette says limma-voom repeated measures two-group comparison needs two

Answer: Get the latest gene name from Entrez ID

Get the latest gene name from Entrez ID

Answer: biomaRt not working - lazy table error

Answer: How to do DESeq2 on Kallisto Data

Awards • All