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News: 2024 May Institute on computation and statistics for mass spectrometry and proteomics
MSstats MSstatsTMT MSstatsShiny MSstatsPTM
23 months ago kohler.d • 0
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Issues setting background in STRINGdb
STRINGdb MSstats
2.5 years ago samsiljee • 0
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Help about MSstats in skyline
Skyline.MS MSstats R
5.7 years ago pokhf123 • 0
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Memory usage and SWATH2stats
swath dia msstats swath2stats
updated 7.1 years ago by • 0 • written 7.1 years ago by • 0
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MaxQuant to MSstat question
msstats
7.1 years ago yasaman.jami • 0
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Cannot install and load MSstats package
proteomics massspectrometry msstats
updated 7.7 years ago by 1.6k • written 7.7 years ago by • 0
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news proteomics course training msstats News
7.9 years ago mnchoi67 ▴ 40
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object 'feaMeasurements' not found for MSstats
R msstats
updated 7.9 years ago by • 0 • written 8.0 years ago by ▴ 10
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor training course msstats proteomics News
7.9 years ago mnchoi67 ▴ 40
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MSstats changes to dataprocess
MSstats
updated 7.9 years ago by ▴ 40 • written 8.0 years ago by • 0
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MSstats package update
MSstats
updated 8.1 years ago by 4.2k • written 8.2 years ago by • 0
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
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C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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