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Job: Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor artificialintelligence JobPosting machinelearning
written 2.3 years ago by 53k
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Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
2.9 years ago alena.vanboemmel • 0
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Job: Job as a bioinformatician in Hamburg, Germany
DimensionReduction SingleCellData multiomics MachineLearning
3.0 years ago Diego's • 0
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Job: Group Leader (Machine Learning/AI), Centre for Molecular Medicine, University of Oslo
Biology AI Machinelearning Precisionmedicine Norway
3.8 years ago delete • 0
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Hierarchical Random Forest classifier
rnaseq machinelearning random forest mlseq
9.9 years ago anthony.hawkins ▴ 10
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Job: Graduate Student in Cancer Genomics / Machine Learning Brigham Young University
machinelearning cancer Job
10.0 years ago Stephen Piccolo ▴ 600
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Possible methodologies of machine learning in R that can assimilate continuous variables along gene expression data for microarray classification
classification machinelearning microarray multivariate caret
updated 10.1 years ago by ★ 13k • written 10.1 years ago by ▴ 840
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Cannot specify probability function for extraTrees model in caret package
caret extraTrees machinelearning
10.5 years ago liuy12 • 0
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Error in R package "cancerclass" with function nvalidate
cancerclass bioconductor machinelearning classification
10.6 years ago svlachavas ▴ 840
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning clinicaldata biomarkers data integration bioconductor
10.6 years ago svlachavas ▴ 840
10 results • Page 1 of 1
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Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards • All
Commentator to sina.nassiri ▴ 130
Popular Question to Hervé Pagès 16k
Popular Question to jared.andrews07 ▴ 30
Popular Question to James W. MacDonald 68k
Popular Question to shepherl 4.2k
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