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multiomics
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Job:
Job as a bioinformatician in Hamburg, Germany
DimensionReduction
SingleCellData
multiomics
MachineLearning
2.4 years ago
Diego's
• 0
1
vote
0
replies
1.1k
views
Job:
Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics
Proteomics
Cancer
Statistics
Bioinformatics
2.8 years ago
Andy Lynch
▴ 120
0
votes
0
replies
1.1k
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Job:
Bioinformatics scientist (Full-time/Permanent) for the analysis of multiomics data in oncology
clinical
R
bioinformatics
multiomics
oncology
3.1 years ago
vincent.piras
• 0
0
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0
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1.5k
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Job:
Post-doc position in multi-omics of Alzheimer's disease at Columbia University in New York City
JobPosting
postdoc
sequencing
multiomics
4.3 years ago • updated 4.2 years ago
lhd
• 0
0
votes
0
replies
1.1k
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Job:
Postdoc/Bioinformatician: Helsinki - Obesity Research Unit, University of Helsinki
multiomics
single-cell RNA
Job
5.6 years ago
mahes.muniandy
• 0
5
votes
4
replies
2.4k
views
Perform correlation analysis between miRNA and mRNA gene expression data on the same TCGA dataset based on the curatedTCGAData
curatedTCGAData
MultiAssayExperiment
multiomics
TCGA
updated 6.1 years ago by
Levi Waldron
★ 1.1k • written 6.1 years ago by
svlachavas
▴ 840
3
votes
1
reply
1.5k
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Horizontal integration of multi omic data, with continuous dependent variable
multiassayexperiment
multiomics
updated 6.9 years ago by
Levi Waldron
★ 1.1k • written 6.9 years ago by
dberel
▴ 20
8
votes
5
replies
2.4k
views
Querying specific TCGA datasets through the MultiAssayExperiment R package
MultiAssayExperiment
curatedCRCdata
multiomics
TCGA
updated 6.9 years ago by
Marcel Ramos
700 • written 6.9 years ago by
svlachavas
▴ 840
8 results • Page
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Answer: Heatmap of rnaseq data with z-score scale
by
James W. MacDonald
68k
Without including the row names for the heatmap, it's impossible to know if the directionality is switched or not. Do note that the orderin…
Comment: Heatmap of rnaseq data with z-score scale
by
giovanna
• 0
![Figure1][1]![Figure2][2] [1]: /media/images/d62918c5-2886-44ae-930d-91d292c3 [2]: /media/images/421df232-8a9c-4016-bc4a-431ca57a
Comment: parameters of filterByExpr
by
caroline.zanchi
▴ 10
Ah yes sorry :) But then I still do not understand why is it that on the plot I attached, the gene definitely has non-0 counts in less than…
Answer: Typo in the help of lmFit()
by
Gordon Smyth
52k
Thanks for the heads-up. > The _Details_ in the documentation of lmFit() still says that the default correlation is 0.75 Yes, you're righ…
Comment: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
by
caroline.zanchi
▴ 10
Thank you ! ![enter image description here][1] In the end I did ```r rn2 <- select(org.Dm.eg.db, row.names(cent_expr_matrix), "GENENAME"…
Votes
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)
Comment: Check removeBatchEffect effectiveness
Answer: Check removeBatchEffect effectiveness
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