Showing : Statistics • reset
0
votes
0
replies
186
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
5 months ago • updated 4 months ago Luo Weijun ★ 1.5k
0
votes
0
replies
200
views
Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
6 months ago m.jackson • 0
1
vote
4
replies
336
views
P adjusted values in Deseq2
DESeq2 Statistics
8 months ago Jesus • 0
0
votes
0
replies
202
views
Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
8 months ago António Miguel de Jesus Domingues ▴ 480
0
votes
0
replies
286
views
Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
8 months ago Laura • 0
0
votes
0
replies
214
views
Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
9 months ago • updated 5 months ago Luo Weijun ★ 1.5k
1
vote
2
replies
200
views
Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 11 months ago by 34k • written 11 months ago by ▴ 40
2
votes
0
replies
240
views
Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
12 months ago Johannes Rainer ★ 1.9k
0
votes
0
replies
195
views
Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
13 months ago • updated 10 months ago whduke • 0
0
votes
0
replies
1.2k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
3.2 years ago • updated 9 months ago Luo Weijun ★ 1.5k
1
vote
0
replies
196
views
Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
15 months ago Fred Hutch (Recruiting) ▴ 40
3
votes
0
replies
1.5k
views
Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
22 months ago • updated 20 months ago Gordon Smyth 43k
0
votes
0
replies
658
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
2.6 years ago • updated 21 months ago Luo Weijun ★ 1.5k
0
votes
1
reply
155
views
How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
22 months ago A • 0
0
votes
1
reply
215
views
Exclude interaction terms from the design
deseq2 statistics modelling
updated 23 months ago by 34k • written 23 months ago by • 0
2
votes
2
replies
431
views
How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 23 months ago by 43k • written 23 months ago by ▴ 10
0
votes
0
replies
285
views
Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
2.1 years ago tatabox • 0
3
votes
3
replies
392
views
Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 2.3 years ago by 34k • written 2.3 years ago by • 0
0
votes
1
reply
335
views
Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
2.6 years ago naglemi ▴ 10
0
votes
0
replies
260
views
package for mismatch distribution?
genetics statistics
2.7 years ago myriam.croze07 • 0
0
votes
4
replies
954
views
DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 2.7 years ago by 34k • written 2.7 years ago by • 0
1
vote
2
replies
422
views
Newbie to all of this
bioconductor statistics
2.9 years ago sportwoo • 0
8
votes
8
replies
2.9k
views
Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 3.0 years ago by 7.6k • written 3.0 years ago by ▴ 50
1
vote
2
replies
383
views
What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 3.1 years ago by 58k • written 3.1 years ago by • 0
1
vote
4
replies
541
views
Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
3.1 years ago Andrea Carenzo • 0
0
votes
2
replies
451
views
comparing two GOstats result lists
gostats statistics
updated 3.3 years ago by 58k • written 3.3 years ago by ▴ 10
1
vote
0
replies
519
views
Job: Statistical Research Associate
biostatistics statistics sas git assay Job
3.4 years ago Fred Hutch (Recruiting) ▴ 40
0
votes
0
replies
471
views
DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
3.4 years ago floriandeckert ▴ 30
0
votes
0
replies
490
views
News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
3.5 years ago kieranrcampbell ▴ 50
0
votes
0
replies
496
views
Two questions about pathifier package
pathways statistics microarray
3.7 years ago arronar • 0
13
votes
6
replies
4.2k
views
Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 3.9 years ago by 58k • written 3.9 years ago by ▴ 20
2
votes
4
replies
546
views
Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 4.0 years ago by 13k • written 4.0 years ago by ▴ 70
0
votes
0
replies
603
views
Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
4.0 years ago rbronste ▴ 60
0
votes
0
replies
858
views
Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
4.6 years ago • updated 4.4 years ago Luo Weijun ★ 1.5k
1
vote
2
replies
1.3k
views
how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 4.5 years ago by • 0 • written 6.5 years ago by ▴ 80
0
votes
0
replies
763
views
Job: Bioinformaticist, Research Programmer
R genomics statistics Job
4.6 years ago radel • 0
1
vote
2
replies
1.8k
views
the statistical test that DESeq2 use
deseq2 statistics
updated 4.6 years ago by 7.6k • written 4.6 years ago by • 0
2
votes
2
replies
3.9k
views
edgeR: How is FDR calculated for logFC? (False Discovery Rate)
edgeR bioconductor fdr statistics differential gene expression
4.8 years ago jol.espinoz ▴ 40
1
vote
0
replies
968
views
Job: PhD Positions in Computational Cancer Research
computational biology image analysis cancer genomics statistics Job
4.8 years ago Bernd Fischer ▴ 540
0
votes
0
replies
676
views
Job: Seeking computational biologists with expertise in RNA-Seq and/or statistics at Immuneering Corporation, Cambridge MA and New York NY
rna-seq CNS Neurodegeneration statistics computational biology Job
4.9 years ago mmartin ▴ 20
0
votes
0
replies
733
views
Job: Postdoc in Biostatistics/Bioinformatics at UNC Charlotte, NC, USA
genetics/genomics omics data statistics development R Job
5.1 years ago • updated 5.0 years ago Luo Weijun ★ 1.5k
0
votes
0
replies
1.3k
views
News: Workshop on Statistical Challenges in Single-Cell Biology, April 30 to May 5, 2017, at Villa Monte Verita, Ascona
workshop statistics single-cell News
5.1 years ago Wolfgang Huber 13k
0
votes
0
replies
1.3k
views
Job: Bioinformatics Programmer (Statistician) at University of California at San Francisco
R bioinformatician job Perl Python statistics Job
5.4 years ago • updated 5.1 years ago clif.duhn • 0
0
votes
4
replies
3.6k
views
10 multiple comparisons in DESeq2
deseq2 rnaseq statistics
updated 5.3 years ago by 34k • written 5.3 years ago by • 0
2
votes
3
replies
855
views
RNAseq outlier is a critical sample
rnaseq outlier statistics batch effect
updated 5.3 years ago by 43k • written 5.3 years ago by • 0
2
votes
1
reply
550
views
limma for gene expression analysis with big and unbalanced sample size
limma microarray statistics
updated 5.3 years ago by ★ 27k • written 5.3 years ago by • 0
7
votes
3
replies
1.7k
views
Differing topTable() results with Limma with and without specifying coefficient
limma microarray statistics
updated 5.4 years ago by 43k • written 5.4 years ago by • 0
19
votes
4
replies
5.6k
views
Confidence intervals on edgeR logFC
edgeR statistics confidence interval
updated 5.5 years ago by • 0 • written 7.0 years ago by ▴ 40
0
votes
2
replies
809
views
Compute test-score statistical significance using control-scores from shuffled population
statistics hypotheses R
5.5 years ago Bade ▴ 310
0
votes
0
replies
1.1k
views
Job: Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job bioinformatics ngs genomics statistics Job
5.6 years ago Hui Sun Leong ▴ 10
50 results • Page 1 of 1
Recent ...
Replies
Comment: Diffbind dba.plotProfile attempt to select less than one element in OneIndex by bhanratt • 0
``` > DBA 10 Samples, 31953 sites in matrix: ID Tissue Factor Condition Replicate Reads FRiP 1 58 1 H3K4me3 AD …
Answer: Warning messages on Apple M1 BigSur by Vincent J. Carey, Jr. 6.5k
We are not producing M1 binaries at this time. If you use the intel version of R under Rosetta 2 you can use the intel mac binaries.
Comment: Issue::DesignPrimers DECIPHER by slwmartin • 0
Hey, I'm having this issue too. I've tried reinstalling using Conda a few times without luck. Did you reinstall with Conda or from the tar …
Comment: Log fold change interpretation of time series with Wald test by jd348 • 0
So would you recommend still using Log2fold change as a measurement for effect size?
Answer: Error in `*tmp*`$samples : $ operator is invalid for atomic vectors by James W. MacDonald 58k
I believe you want ``` > x <- as.matrix(read.delim("E:/bioinformatic/RNAseq/GSE168008_raw_count.txt", sep ="" ,row.names = 1)) > sampl…
Votes
Comment: Use of coef() as a measure of effect size in a multiple regression using DESeq2
Answer: Log fold change interpretation of time series with Wald test
A: gviz: name of tracks disappeas
Answer: Degust: what normalization method does it use
Answer: ylim and xlim in Enhanced Volcano
Awards • All
Teacher to Vincent J. Carey, Jr. 6.5k
Scholar to Rory Stark ★ 4.1k
Scholar to jbnrodriguez • 0
Scholar to Yang Liao ▴ 260
Scholar to James W. MacDonald 58k
Locations • All
Switzerland, 49 minutes ago
Hong Kong, 2 hours ago
Germany / Heidelberg / DKFZ, 2 hours ago
China, 3 hours ago
EMBL Heidelberg / de.NBI, 4 hours ago
Traffic: 201 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6