Bioconductor MeDIP-seq

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

3.0 years ago rtrivedi1 ▴ 10

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6.6k

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diffbind medip-seq edger deseq2

updated 6.5 years ago by Rory Stark ★ 5.2k • written 8.2 years ago by florian.noack ▴ 60

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1.9k

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medips bsgenome medip-seq

updated 6.2 years ago by Lukas Chavez ▴ 570 • written 6.2 years ago by vjain • 0

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1.9k

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R medips medip-seq

7.8 years ago • updated 6.9 years ago stb • 0

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1.6k

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medips medip-seq error lukas

updated 7.0 years ago by Matthias Lienhard ▴ 240 • written 7.0 years ago by anupriyaverma1408 • 0

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1.3k

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MEDIPS MeDIP-seq

updated 2.6 years ago by Lukas ▴ 20 • written 4.5 years ago by lshepard ▴ 40

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975

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medips medip-seq dna methylation dmr analysis

updated 5.5 years ago by Lukas Chavez ▴ 570 • written 5.5 years ago by mtefit • 0

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1.2k

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medips medip-seq peak finding luckas

updated 7.0 years ago by Lukas Chavez ▴ 570 • written 7.0 years ago by anupriyaverma1408 • 0

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1.5k

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R medip-seq medips bwa

updated 7.8 years ago by Lukas Chavez ▴ 570 • written 7.8 years ago by stb • 0

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1.1k

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medips medip-seq R pair-end reads

updated 7.7 years ago by Lukas Chavez ▴ 570 • written 7.7 years ago by stb • 0

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1.1k

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medips R medip-seq pair-end reads

updated 7.5 years ago by Lukas Chavez ▴ 570 • written 7.5 years ago by stb • 0

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822

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medip-seq methylation CpGs

5.5 years ago saripalligautam86 ▴ 10

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771

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medip-seq createset

updated 5.4 years ago by Bioconductor Community 0 • written 5.5 years ago by oussama.badad • 0

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1.3k

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annotation chippeakanno rattus norvegicus medip-seq

8.2 years ago Vang Le ▴ 80

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545

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R medip-seq MEDIPS

15 months ago Luomeng • 0

15 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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