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Meta Analysis
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metaDE R and RRA R
microarray
meta analysis
5.9 years ago
lily
▴ 20
0
votes
1
reply
857
views
Meta_analysis of microarray data
microarray
microarray data
Meta Analysis
platform
updated 6.8 years ago by
James W. MacDonald
68k • written 6.8 years ago by
Jamal
• 0
0
votes
1
reply
1.6k
views
Meta_analysis of different platforms of microarray data
microarray
meta analysis
cancer
Software
R
updated 7.0 years ago by
James W. MacDonald
68k • written 7.0 years ago by
Jamal
• 0
0
votes
0
replies
873
views
how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA
pvalcombination
meta analysis
metaMA
DEGs' indices
7.6 years ago
niteshkumar20sept
• 0
0
votes
1
reply
1.1k
views
meta de r package
meta analysis
8.1 years ago
lily
▴ 20
1
vote
0
replies
1.4k
views
Meta Analysis on CAMERA results
limma
camera
cohen d
meta analysis
8.8 years ago
Andy91
▴ 60
0
votes
1
reply
1.6k
views
meta analysis of clc output(differential expression data )
rnaseq
metaseq
clc output
pvalue
meta analysis
updated 9.0 years ago by
Koki
▴ 10 • written 9.0 years ago by
hassangiahi
• 0
2
votes
3
replies
2.3k
views
combine different GSE on different GPL
annotation
genesymbols
meta analysis
9.7 years ago
wahaha123
• 0
8 results • Page
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Comment: segfault in edgeR glmQLFit
by
Gordon Smyth
53k
We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.
Answer: Ensembl site unresponsive via biomaRt
by
horaortiz8
• 0
I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…
Comment: segfault in edgeR glmQLFit
by
Mark
• 0
Thanks! We had been considering some of these adjustments as well, given the small number of features and total reads. Your advice is well-…
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
ATpoint
★ 5.0k
> and I first used the normalized counts You would not use these normalized counts for PCA as they're not on log2 scale. As such, the feat…
Comment: EuroBioC2026 abstract submission is open!
by
TikTsokaasocissalpc
• 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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