Bioconductor Meta Analysis

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microarray meta analysis

5.9 years ago lily ▴ 20

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873

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microarray microarray data Meta Analysis platform

updated 6.9 years ago by James W. MacDonald 68k • written 6.9 years ago by Jamal • 0

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1.6k

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microarray meta analysis cancer Software R

updated 7.0 years ago by James W. MacDonald 68k • written 7.0 years ago by Jamal • 0

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895

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MAMA pvalcombination meta analysis metaMA DEGs' indices

7.7 years ago niteshkumar20sept • 0

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1.1k

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meta analysis

8.1 years ago lily ▴ 20

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limma camera cohen d meta analysis

8.9 years ago Andy91 ▴ 60

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1.7k

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rnaseq metaseq clc output pvalue meta analysis

updated 9.0 years ago by Koki ▴ 10 • written 9.0 years ago by hassangiahi • 0

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2.4k

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annotation genesymbols meta analysis

9.8 years ago wahaha123 • 0

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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