Bioconductor Output

Showing : Output • reset

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output difference

3.6 years ago Jamie • 0

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msa decipher output prettyPrint

updated 5.4 years ago by UBod ▴ 300 • written 5.4 years ago by matamunee • 0

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2.4k

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genesis output score

updated 6.4 years ago by Stephanie M. Gogarten ▴ 890 • written 6.4 years ago by lassana.a.samarakoon ▴ 10

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1.9k

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MEDIPS Output

7.8 years ago vjain • 0

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voomWithQualityWeights output

updated 8.2 years ago by Gordon Smyth 53k • written 8.2 years ago by harelarik ▴ 60

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limma voom edgeR toptable output

updated 8.5 years ago by Aaron Lun ★ 29k • written 8.5 years ago by heikki.sarin ▴ 10

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msa alignement output sorted

9.0 years ago Olorin ▴ 50

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cytofkit cytof write.csv output

updated 9.3 years ago by chen_hao ▴ 30 • written 9.3 years ago by cjackson13 • 0

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deseq2 gene columns output

updated 10.3 years ago by Michael Love 43k • written 10.3 years ago by amyfm ▴ 10

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Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Korneel • 0

Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…

Comment: Pathway abundance data from Curatedmetagenomics by yesquokkan • 0

Hello, I was also wondering about the same issue. Did you figure it out?

Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0

FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 160

This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…

Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Votes

A: WGCNA sample size minimum: why?

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name

Answer: Can you colour dendrogram branch clusters in pheatmap?

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

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Popular Question to Peter Hickey ▴ 760