Showing : PROcess • reset
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Memory Problems
PROcess PROcess
updated 22.2 years ago by 68k • written 22.2 years ago by ▴ 70
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0
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795
views
R on Itanium in 64bit mode? Experiences?
Normalization PROcess Normalization PROcess
22.2 years ago Michael Seewald ▴ 130
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4
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1.8k
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Annotation data package is not being created
Annotation Organism PROcess Annotation Organism PROcess
updated 22.2 years ago by ★ 2.9k • written 22.2 years ago by ▴ 70
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4
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1.6k
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High-performance Bioconductor experiments
GO Cancer PROcess GO Cancer PROcess
22.2 years ago A.J. Rossini ▴ 810
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0
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1.0k
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RE: gcrma
hgu133a affycomp gcrma PROcess hgu133a affycomp gcrma PROcess
22.2 years ago Christian.Stratowa@vie.boehringer-ingel… ▴ 270
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1
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1.3k
views
gcrma
hgu133a affycomp gcrma PROcess hgu133a affycomp gcrma PROcess
updated 22.2 years ago by ★ 2.3k • written 22.2 years ago by ▴ 270
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827
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Support for binary cel files
affy PROcess affy PROcess
22.2 years ago Ben Bolstad ★ 1.1k
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811
views
Bioconductor Programmer's Reference
PROcess PROcess
22.2 years ago Jeff Gentry ★ 3.9k
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2
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1.4k
views
Probe Cell
probe PROcess probe PROcess
updated 22.2 years ago by ▴ 220 • written 22.2 years ago by ▴ 30
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0
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1.0k
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Hi memory usage...problems
PROcess PROcess
22.3 years ago Victor M Trevino-Alvarado ▴ 20
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1
reply
879
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problems with affy package
cdf PROcess cdf PROcess
updated 22.3 years ago by ★ 13k • written 22.3 years ago by ▴ 70
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0
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753
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The upcoming release: how you might be able to help
Cancer PROcess Cancer PROcess
22.3 years ago A.J. Rossini ▴ 810
0
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1
reply
862
views
where are the developmental packages ?!!
reposTools PROcess reposTools PROcess
updated 22.3 years ago by ★ 5.5k • written 22.3 years ago by ▴ 720
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0
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989
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Re: [R] Source package installation for WinXPpro
Microarray Cancer affy PROcess Microarray Cancer affy PROcess
22.3 years ago James W. MacDonald 68k
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740
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Source package installation for WinXPpro
affy PROcess affy PROcess
22.3 years ago Phguardiol@aol.com ▴ 720
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0
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1.2k
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Limma or something else ? plus Normalization question
Normalization affy limma LPE PROcess Normalization affy limma LPE PROcess
22.4 years ago Gordon Smyth 53k
0
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1
reply
1.2k
views
Limma or something else ? plus Normalization question
limma LPE PROcess limma LPE PROcess
updated 22.4 years ago by 53k • written 22.4 years ago by ▴ 720
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0
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838
views
other timimg questions
limma PROcess limma PROcess
22.4 years ago Rob Dunne ▴ 230
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0
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1.3k
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RES: Genechip experiment in limma
Microarray Normalization Classification limma PROcess Microarray Normalization limma
22.5 years ago Gordon Smyth 53k
0
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3
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1.4k
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Post-justRMA "quality control"
PROcess PROcess
22.5 years ago Michael Barnes ▴ 80
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0
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1.2k
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Removing data already read in.... limma and marrayInput
Normalization limma PROcess Normalization limma PROcess
22.5 years ago Gordon Smyth 53k
0
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0
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888
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Removing data already read in.... limma and marrayInput
limma PROcess limma PROcess
22.5 years ago michael watson IAH-C ★ 3.4k
0
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3
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1.9k
views
RNA degradation (Chris Paulse)
Microarray Normalization Cancer probe ROC limma PROcess Microarray Normalization Cancer
updated 22.5 years ago by 68k • written 22.5 years ago by ▴ 70
0
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1
reply
920
views
Repost: marrayNorm 1.1.3 gets stuck
PROcess PROcess
updated 22.5 years ago by 53k • written 22.5 years ago by ▴ 230
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0
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873
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marrayNorm 1.1.3 gets stuck
PROcess PROcess
22.5 years ago Rob Dunne ▴ 230
0
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5
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1.8k
views
R Hangs
reposTools PROcess reposTools PROcess
updated 22.6 years ago by ▴ 360 • written 22.6 years ago by ★ 3.4k
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5
replies
1.5k
views
problems with affy in unix
affy PROcess affy PROcess
22.6 years ago feiwan ▴ 20
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1
reply
1.0k
views
SMD Raw Data -> marrayRaw Import
PROcess PROcess
updated 22.6 years ago by ▴ 920 • written 22.6 years ago by ▴ 220
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2
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1.2k
views
Restatement: Was Re: Memory Requirments
GO affy PROcess GO affy PROcess
updated 22.6 years ago by ★ 2.3k • written 22.6 years ago by ▴ 80
0
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2
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1.0k
views
Memory Requirments
PROcess PROcess
updated 22.6 years ago by ★ 5.5k • written 22.6 years ago by ▴ 80
0
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0
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919
views
Bioconductor commands in Unix online documentation request
PROcess PROcess
22.7 years ago Adaikalavan Ramasamy ▴ 140
0
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0
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980
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loading affy cdf files
cdf affy PROcess cdf affy PROcess
22.7 years ago Nancy Petersen ▴ 10
0
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0
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982
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queries regarding bioconductor installation
reposTools PROcess reposTools PROcess
22.7 years ago Stephen Eglen ▴ 20
0
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1
reply
909
views
http://bioconductor.org/data/dataRepos/mgu74a_1.2.6.tar.gz
PROcess PROcess
updated 22.7 years ago by ★ 2.9k • written 22.7 years ago by ▴ 30
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3
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1.7k
views
Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
22.9 years ago • updated 22.8 years ago madman@jimmy.harvard.edu ▴ 850
0
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2
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1.0k
views
memory problem with RMA
GO affy PROcess GO affy PROcess
updated 22.8 years ago by ▴ 20 • written 22.8 years ago by ▴ 720
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0
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1.3k
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normalization and clustering etc...
Bayesian Clustering Leukemia affy PROcess DOSE Bayesian Clustering Leukemia affy PROcess
22.9 years ago Phguardiol@aol.com ▴ 720
0
votes
4
replies
1.2k
views
cdf affy PROcess cdf affy PROcess
updated 22.9 years ago by ▴ 30 • written 22.9 years ago by ▴ 60
0
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1
reply
1.1k
views
memory problem with Affy
affy PROcess affy PROcess
updated 22.9 years ago by ★ 3.9k • written 22.9 years ago by ▴ 720
0
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7
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1.9k
views
Try to run a lots of chips: 32 bits vs 64 bits
Normalization PROcess Normalization PROcess
updated 22.9 years ago by ★ 5.5k • written 22.9 years ago by ▴ 720
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2
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1.6k
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Coercing Normalized Data to exprSet
Biobase PROcess maanova Biobase PROcess maanova
23.0 years ago Barry Henderson ▴ 250
0
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0
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1.6k
views
InfoVis 2003 Call for Papers
Visualization PROcess Category Visualization PROcess Category
23.0 years ago rgentleman ★ 5.5k
0
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0
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802
views
Widget option enabled:Thank you
PROcess PROcess
23.0 years ago Tapan Mehta ▴ 270
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0
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1.0k
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protien and peptide mass spectrometry
genefilter PROcess genefilter PROcess
23.1 years ago Nicholas Lewin-Koh ▴ 430
0
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1
reply
1.7k
views
Job Posting in Biostatistics/Statistics
Bayesian Survival Cancer PROcess ASSET Bayesian Survival Cancer PROcess ASSET
updated 23.2 years ago by ▴ 80 • written 23.2 years ago by ▴ 10
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6
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1.9k
views
request for letter of support
PROcess PROcess
updated 23.2 years ago by ▴ 220 • written 23.2 years ago by ★ 5.5k
0
votes
1
reply
1.3k
views
Problem whit Affy
GO cdf probe PROcess GO cdf probe PROcess
updated 23.4 years ago by ▴ 640 • written 23.4 years ago by ▴ 10
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votes
1
reply
1.2k
views
Annotation for Nonspecificity of Affymetrix Probes?
probe PROcess probe PROcess
updated 23.5 years ago by ★ 5.5k • written 23.5 years ago by ▴ 70
0
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2
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1.7k
views
affy expression values
Proteomics affy PROcess Proteomics affy PROcess
updated 23.5 years ago by ▴ 640 • written 23.5 years ago by ▴ 10
0
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0
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1.3k
views
(1) Anova for 12 Affy yeast chips (Yg98) // (2) Problem fitting Li&Wong model with Affy 1.0 :
GO Yeast cdf genefilter affy PROcess GO Yeast cdf genefilter affy PROcess
23.8 years ago julien.sylvestre@wotan.ens.fr ▴ 50
651 results • Page 13 of 14
Recent ...
Replies
Comment: Chip Seq Analysis of RNA Polymerase 2 by Tikaaaq2c • 0
Without proper scaling or an enrichment check , Pol 2 peaks can appear flat against the background. If the data remains noisy, you might w…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by Tikaaaq2c • 0
Organizing complex transcripts requires the same discipline as managing a digital library on a learning platform. Many researchers use a [S…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Votes
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
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