Bioconductor RNA-Seq

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2.0k

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deseq2 rna-seq

updated 10.3 years ago by Dario Strbenac ★ 1.6k • written 10.3 years ago by ejmcmaho • 0

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6.5k

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deseq2 LRT RNA-Seq

updated 10.5 years ago by Michael Love 43k • written 10.5 years ago by solgakar@bi.technion.ac.il ▴ 90

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11k

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deseq rna-seq

10.6 years ago • updated 10.5 years ago rodriguez.varenka • 0

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2.0k

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rna-seq summarizeoverlaps

updated 10.6 years ago by Valerie Obenchain ★ 6.8k • written 10.6 years ago by Vincent J. Carey, Jr. 6.7k

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2.0k

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normalization rna-seq deseq2 edger smart

updated 10.6 years ago by Ryan C. Thompson ★ 7.9k • written 10.6 years ago by Jon Bråte ▴ 270

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8.0k

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deg rna-seq rpkm

updated 10.6 years ago by b.nota ▴ 370 • written 10.6 years ago by Yue Zhao • 0

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1.6k

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Course RNA-Seq Chip-seq Parallel News

10.6 years ago Martin Morgan 25k

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2.4k

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rna-seq differential expression

updated 10.6 years ago by James W. MacDonald 68k • written 10.6 years ago by carleshf ▴ 10

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1.7k

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deseq2 rna-seq

10.6 years ago anpham ▴ 70

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1.7k

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rna-seq course News

10.6 years ago rcaloger ▴ 500

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3.7k

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RNA-seq edgeR estimatedispersions bacteria

10.7 years ago Mauve • 0

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2.7k

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edgeR rna-seq replicates

updated 10.7 years ago by James W. MacDonald 68k • written 10.7 years ago by eb0906 • 0

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2.4k

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rna-seq featurecounts

10.7 years ago ccheung • 0

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18k

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deseq2 deseq rna-seq

10.7 years ago gavrielmatt ▴ 30

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4.3k

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WGCNA RNA-seq signedKME

updated 10.8 years ago by Peter Langfelder ★ 3.0k • written 10.8 years ago by vieuphoria ▴ 10

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2.6k

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deseq2 deseq rna-seq

10.8 years ago solgakar@bi.technion.ac.il ▴ 90

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2.9k

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edgeR RNA-seq FDR

updated 10.8 years ago by Gordon Smyth 53k • written 10.8 years ago by OLIVER, DAVID ▴ 10

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1.7k

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edgeR calcNormFactors RNA-seq

updated 10.9 years ago by Aaron Lun ★ 29k • written 10.9 years ago by Peter • 0

418 results • Page 9 of 9

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Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 4.9k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 4.9k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0

The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…

Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k

Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…

Votes

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

Answer: ordinary t from limma [was: How would I normally compare swirl?]

Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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