Bioconductor SAM

Showing : SAM • reset

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2.8k

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featurecounts SAM htseqcounts

updated 22 months ago by Yang Liao ▴ 450 • written 8.0 years ago by courtney.stairs • 0

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640

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microarray SAM

updated 6.0 years ago by James W. MacDonald 68k • written 6.0 years ago by xgt1986627 ▴ 10

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1.5k

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SAM samtools pairwisealignment alignment blastn

6.8 years ago ktehmsen • 0

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1.7k

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SAM siggenes microarray gene expression sam

8.3 years ago Brian Smith ▴ 120

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1.6k

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differential gene expression sam

updated 9.0 years ago by Aaron Lun ★ 28k • written 9.0 years ago by cirisarri95 • 0

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1.7k

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DEXSeq splicing python SAM

9.6 years ago Fiona ▴ 70

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6.9k

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bam sam alignment biostrings

10.3 years ago ben.ward ▴ 30

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1.6k

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samr SAM siggenes bioconductor differential gene expression

10.3 years ago svlachavas ▴ 840

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1.7k

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r SAM bioconductor

updated 10.3 years ago by Simon Anders ★ 3.8k • written 10.3 years ago by svlachavas ▴ 840

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2.9k

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Limma SAM differential expression

updated 10.5 years ago by James W. MacDonald 68k • written 10.5 years ago by Bade ▴ 310

10 results • Page 1 of 1

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Answer: GSVA 1.52.2 (new API) nb of workers? by chaneymiller5908958 • 0

@[block blast][1] I'm running into the same issue with the parallelization. [1]: https://blockblastonline.com

Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove by macdonaldfrench7286566 • 0

Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by Kateřina • 0

I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!

Comment: GAlignments Cigar to GRanges by pineiroalejandro • 0

Wow, so easy! Thanks for your quick reply.

Comment: EuroBioC2023 abstract submission is open! by eilishhill8 • 0

Thanks for sharing this. I got it clearly now. Submit here: [https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/][1] [melon sa…

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Answer: GAlignments Cigar to GRanges

When running contrasts, does it use normalized read counts?

Importing Salmon counts with tximport with host and virus genomes

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