Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
pairwisealignment
•
reset
0
votes
0
replies
1.3k
views
Question about converting SAM alignment file data to a visual text alignment (e.g., resembling blastn alignment)
SAM
samtools
pairwisealignment
alignment
blastn
6.3 years ago
ktehmsen
• 0
0
votes
3
replies
1.7k
views
How to find multiple overlaps with pairwiseAlignment()?
biostrings
pairwisealignment
updated 6.9 years ago by
Hervé Pagès
16k • written 6.9 years ago by
kgorczak
▴ 10
0
votes
4
replies
1.6k
views
Query with Biostrings pairwise alignment output positon
biostrings
alignment
pairwisealignment
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
dhwani2410
• 0
1
vote
2
replies
3.9k
views
Calculate the number of SNP differences between sequences in multiple alignment
pairwisealignment
SNP
dnasequence
7.8 years ago
lordbleys
• 0
0
votes
0
replies
1.2k
views
Translate to aminoacid, align pairwise and un-translate back to DNA
translation
pairwisealignment
8.3 years ago
igferres
• 0
0
votes
1
reply
1.0k
views
Mapping sequence features to alignments
pairwisealignment
indel
updated 8.4 years ago by
Hervé Pagès
16k • written 8.4 years ago by
oliwindram
▴ 10
3
votes
2
replies
1.6k
views
pairwiseAlignments coordinate mapping?
biostrings
pairwisealignment
updated 8.6 years ago by
Hervé Pagès
16k • written 8.6 years ago by
Steve Lianoglou
★ 13k
2
votes
1
reply
1.2k
views
Error in score() function on pairwiseAlignment()
biostrings
pairwisealignment
updated 8.6 years ago by
shepherl
4.1k • written 8.6 years ago by
jdydu
• 0
0
votes
1
reply
1.4k
views
pairwiseAlignment() - Similarity NA% ?
biostrings
pairwisealignment
updated 9.2 years ago by
Hervé Pagès
16k • written 9.2 years ago by
boris.steipe
• 0
2
votes
3
replies
1.3k
views
indels located at the edges of subject and Biostrings pairwiseAlignment function
pairwisealignment
biostrings
9.2 years ago
vincent.plagnol
▴ 10
0
votes
2
replies
1.9k
views
inconsistent pairwiseAlignment behaviour (Biostrings) with multiple alignments with identical scores
biostrings
pairwisealignment
9.2 years ago
vincent.plagnol
▴ 10
4
votes
5
replies
3.0k
views
global alignment in Biostrings , Memory fails when seq. lengths around 50K bp
Biostrings
pairwiseAlignment
updated 10.1 years ago by
Hervé Pagès
16k • written 10.1 years ago by
branislav misovic
▴ 120
12 results • Page
1 of 1
Recent ...
Replies
Comment: Help using rtracklayer for gene ID extraction
by
James W. MacDonald
67k
Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello Mercedeh, excuse me for not explaining it adecuately, Im using the "Part3 - Identify significant miRNA mRNA relationships for 2 time …
Answer: Need new version : tx2gene.gencode.v47.csv
by
Guido Hooiveld
★ 4.1k
Assuming that you would like to import the results from `salmon`, it is highly recommended to now use `tximeta`. By doing so, all required …
Comment: Help using rtracklayer for gene ID extraction
by
Aichatou
• 0
Hello, Please disregard the previous post. it's working now, i think. I am able to create the txdb object but I can't see all the other inf…
Comment: p value is 0, padj is 0
by
Wirayatida
• 0
Than you so much. My counts are 47,37 and 72 for mock. The treatment is 8153, 6723 and 8024.
Votes
Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?
Answer: Feature Counts - potential bug with outfile.jcounts
Answer: Feature Counts - potential bug with outfile.jcounts
Answer: Pre-filtering TPM kallisto for ssGSEA / DESeq2
Answer: Mapping Between GenBank ID's and Uniprot
Awards
• All
Popular Question
to
Lluís Revilla Sancho
▴ 760
Popular Question
to
giulia.gentile
▴ 10
Popular Question
to
mat149
▴ 80
Popular Question
to
Yang Shi
▴ 10
Popular Question
to
shepherl
4.1k
Locations
• All
WEHI, Melbourne, Australia,
16 minutes ago
Spain,
19 minutes ago
Spain,
19 minutes ago
Ireland,
24 minutes ago
United States,
28 minutes ago
Traffic: 680 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6