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python
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0
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2
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833
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TnSeq as ZINB? Alternatives in R?
DESeq2
R
edgeR
Python
TnSeq
updated 19 months ago by
chaco001
• 0 • written 20 months ago by
David R
▴ 90
1
vote
0
replies
885
views
Job:
Bioconductor Core developers group opening
R
cloud
github
python
git
23 months ago
Vincent J. Carey, Jr.
6.7k
0
votes
1
reply
953
views
Change the interval of bed file
mappability
bed
python
updated 2.5 years ago by
James W. MacDonald
66k • written 2.5 years ago by
the
• 0
0
votes
1
reply
885
views
python and R
snpeff
python
tophat
r
RNAseq123
updated 3.0 years ago by
Kevin Blighe
★ 4.0k • written 3.0 years ago by
kusum
• 0
0
votes
0
replies
900
views
Job:
Senior Data Engineer | Poland | remote
AWS
BigData
Engineer
python
3.2 years ago
Ewa
• 0
1
vote
2
replies
1.6k
views
DEXSeq Python script dexseq_prepare_annotation.py unable to process my .gtf file
dexseq
python
gtf
gff3
annotation
4.2 years ago
Raito92
▴ 60
1
vote
2
replies
1.4k
views
Load data with rhdf5
rhdf5
python
updated 17 months ago by
alex46015
• 0 • written 4.2 years ago by
jose.wo
• 0
2
votes
4
replies
1.2k
views
Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R
python
normalization
matrix
updated 4.9 years ago by
shahryary
▴ 30 • written 4.9 years ago by
mohammedtoufiq91
▴ 10
0
votes
0
replies
1.0k
views
Job:
Bioinformatics Analyst II, Genomics Shared Resource (Seattle, WA)
GENOMICS
BIOINFORMATICS
SEATTLE
R
PYTHON
Job
4.9 years ago
Fred Hutch (Recruiting)
▴ 40
0
votes
0
replies
896
views
Job:
Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R
Python
Computational-Biology
Cancer
Job
5.3 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.1k
views
Job:
Bioinformatics Scientist II
bioinformatics
scientist
python
computational
Job
5.5 years ago
careers
• 0
0
votes
0
replies
1.1k
views
Job:
2 Postdoc Positions in computational epigenetics and non-coding RNA analysis (#CNPD08)
bioinformatician job
rna-seq
chipseq
gsea
python
Job
6.0 years ago
l.brown
▴ 10
1
vote
1
reply
818
views
Python functionality feature request
python
bioconductor
updated 6.0 years ago by
Martin Morgan
25k • written 6.0 years ago by
quijotejmartinez
• 0
0
votes
0
replies
1.3k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
6.3 years ago
EMBL Recruitment
• 0
2
votes
0
replies
1.3k
views
Job:
Full-time bioinformatics instructor position at Fred Hutch
R
shell
Python
SQL
Job
6.5 years ago
ematsen
▴ 20
5
votes
0
replies
1.5k
views
Job:
Summer Studentships in Data Science (Computational Cancer Biology) at the University of Cambridge
R
python
deep learning
machine learning
cancer genomics
Job
7.3 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.4k
views
Job:
Data Scientist / Bioinformatician / Statistician at University of California
R
python
stats
bioinformatics
perl
Job
8.0 years ago
clif.duhn
• 0
0
votes
0
replies
1.9k
views
Job:
Bioinformatics Programmer (Statistician) at University of California at San Francisco
R
bioinformatician job
Perl
Python
statistics
Job
8.3 years ago • updated 8.0 years ago
clif.duhn
• 0
0
votes
0
replies
2.0k
views
Job:
Harvard Medical School: Biomedical Data Scientist Postdoctoral Associate
biomedical informatics
data science
python
SQL
Job
8.5 years ago
Doe, Aimee
▴ 40
5
votes
23
replies
6.5k
views
Convertion of indexed bam file to tsv file format
python
samtools
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
malikbashirkhan2
• 0
0
votes
0
replies
1.5k
views
DEXSeq analysis of alternative splicing: error 'SAM optional field tag NH not found'
DEXSeq
splicing
python
SAM
8.8 years ago
Fiona
▴ 70
3
votes
4
replies
1.8k
views
seq2pathway error on Mac OS X
seq2pathway
error
python
mac os x
8.9 years ago
termanini
▴ 10
0
votes
0
replies
1.7k
views
Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
9.1 years ago
careers
• 0
23 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Michael Love
42k
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