Showing : Segmentation • reset
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Prepare data frame of 3 column-lists or matrix of three-column lists from VCF or BAM files
BAM Segmentation CINdex VCF Data
2.3 years ago raven1306 • 0
0
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1
reply
956
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PureCN: Why is average coverage used for segmentation and not the denoised fragment counts?
PureCN CNV CNA segmentation calculateTangentNormal
updated 4.9 years ago by ▴ 130 • written 4.9 years ago by • 0
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940
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Reference for minimum number of probes commonly used for segmentation of microarray data
segmentation reference CNA TCGA
5.8 years ago jlarsen728 • 0
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5
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1.4k
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CRImage createTrainingSet package is not available to install
classification segmentation cell types image analysis crimage
6.3 years ago Jenny.chien • 0
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3
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1.8k
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Analysing TCGA Level 3 Copy Number Data Location of markers in the genome
TCGA Cancer dnacopy segmentation
updated 7.4 years ago by ▴ 130 • written 7.4 years ago by • 0
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2
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1.5k
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DNAcopy segmentation issue: min.width argument not working?
dnacopy segmentation CBS
updated 7.8 years ago by ▴ 30 • written 7.8 years ago by ▴ 10
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2
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1.4k
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GCRMA segmentation fault
gcrma segmentation fault segfault
updated 8.6 years ago by 67k • written 8.6 years ago by • 0
7 results • Page 1 of 1
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Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
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Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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