Bioconductor Timecourse

Showing : Timecourse • reset

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1.4k

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Transcriptomics TimeCourse DESeq2

updated 9 months ago by Michael Love 42k • written 10 months ago by smac97 • 0

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928

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time-series DESeq2 RNASeq timecoursedata TimeCourse

updated 8 months ago by ATpoint ★ 4.1k • written 8 months ago by Debebe • 0

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2.7k

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limma edger timecourse without replicate voom

written 7.5 years ago by Camila Orellana ▴ 10

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565

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timecourse KEGG DESeq2

updated 11 months ago by Michael Love 42k • written 11 months ago by Fred • 0

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172

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DESeq2 timecourse DifferentialExpression

updated 4 weeks ago by James W. MacDonald 65k • written 4 weeks ago by joshua.mannheimer • 0

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1.4k

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deseq2 timecourse design and contrast matrix

updated 8 weeks ago by ta_awwad ▴ 10 • written 8.5 years ago by Assa Yeroslaviz ★ 1.5k

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512

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timecoursedata RNASeqData TimeCourse DESeq2

updated 10 months ago by Michael Love 42k • written 10 months ago by georgii.vdovin • 0

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244

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DESeq2 timecourse time

updated 3 months ago by Michael Love 42k • written 3 months ago by Anastasiia • 0

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272

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RNASeq DESeq2 timecourse

3 months ago WS • 0

9 results • Page 1 of 1

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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Popular Question to WouterDeCoster ▴ 130

Scholar to Michael Love 42k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k