Showing : affylmGUI • reset
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affylmGUI problem with tkcmd
affylmGUI affylmGUI
updated 18.8 years ago by ▴ 80 • written 18.8 years ago by ★ 7.4k
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870
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affylmGUI problem with tkcmd
affylmGUI affylmGUI
18.8 years ago Wonjong Moon ▴ 80
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3
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1.4k
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Using CDF file on affylmGUI
Proteomics GO affylmGUI Proteomics GO affylmGUI
updated 18.9 years ago by ▴ 450 • written 18.9 years ago by ▴ 70
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1.3k
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limma citations [was LimmaGUI for illumina data]
Annotation GUI Kidney limma affylmGUI limmaGUI Annotation GUI Kidney limma affylmGUI
19.4 years ago Gordon Smyth 53k
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LimmaGUI for illumina data
GUI affy limma affylmGUI limmaGUI beadarray GUI affy limma affylmGUI limmaGUI beadarray
19.4 years ago Mark Dunning ▴ 320
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1.2k
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LimmaGUI for illumina data
GUI limma affylmGUI limmaGUI GUI limma affylmGUI limmaGUI
19.4 years ago Roy Williams ▴ 10
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615
views
AffylmGUI
affylmGUI affylmGUI
19.5 years ago Gordon Smyth 53k
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1.1k
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Request for users of limmaGUI, affylmGUI, JSM2005 or IBC2004 microarray course websites or my R-Tcl/Tk examples
affylmGUI limmaGUI affylmGUI limmaGUI
19.7 years ago James Wettenhall ▴ 1000
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1.1k
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Access to Affy chip annotation data in affylmGUI
mouse4302 affylmGUI mouse4302 affylmGUI
updated 19.7 years ago by ★ 7.4k • written 19.7 years ago by ▴ 10
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1.0k
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FW: Question (vennDiagram vs. topTable) for AffylmGUI 1.3.0
GO limma affylmGUI GO limma affylmGUI
updated 20.0 years ago by 53k • written 20.1 years ago by ▴ 50
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930
views
Analisys with MAS5 and affyPLM
affylmGUI affylmGUI
20.2 years ago Pedro Botías ▴ 80
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3
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1.2k
views
Error messages in affylmGUI on PC with respect to plotting
limma affyPLM affylmGUI limma affyPLM affylmGUI
20.2 years ago Seth Falcon ★ 7.4k
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952
views
Error messages in affylmGUI on PC with respect to plotting
Cancer limma affyPLM affylmGUI Cancer limma affyPLM affylmGUI
20.2 years ago Richard Friedman ★ 2.0k
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860
views
error message in affylmGUI on PC
Cancer affylmGUI Cancer affylmGUI
20.3 years ago Richard Friedman ★ 2.0k
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5
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1.8k
views
Problem with Installing affylmGUI on MAC OS X
Cancer affylmGUI Cancer affylmGUI
20.3 years ago Richard Friedman ★ 2.0k
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0
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1.2k
views
Question (vennDiagram vs. topTable) + Patch (plotTitle for vennDiagram) for AffylmGUI 1.3.0
affylmGUI affylmGUI
20.4 years ago Steffen Moeller ▴ 40
0
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3
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1.5k
views
Defining and handling replicates
GO affy limma affylmGUI GO affy limma affylmGUI
updated 20.4 years ago by 53k • written 20.4 years ago by ▴ 70
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674
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AffylmGUI Comparisons and Filtering
Microarray affylmGUI Microarray affylmGUI
20.4 years ago Quentin Anstee ▴ 110
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741
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Re: [Bioc-devel] Error in mget(ls(cdfenv), env = rgu34aGENENAME) : Object "rgu34aGENENAME" not found
Annotation GO affylmGUI Annotation GO affylmGUI
20.6 years ago James Wettenhall ▴ 1000
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1.1k
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Please help: AffylmGUI errors (more detail)
Normalization hgu133a affylmGUI ASSIGN Normalization hgu133a affylmGUI ASSIGN
20.7 years ago Aaron Hamilton ▴ 30
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2
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1.2k
views
affylmGUI error when normalizing
Microarray Normalization affylmGUI Microarray Normalization affylmGUI
updated 20.7 years ago by ▴ 1000 • written 20.7 years ago by ▴ 30
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1
reply
784
views
Please help: AffylmGUI errors
Microarray affylmGUI ASSIGN Microarray affylmGUI ASSIGN
updated 20.7 years ago by ★ 7.4k • written 20.7 years ago by ▴ 30
0
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0
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874
views
affylmGUI - feedback, questions
gcrma GeneSpring affylmGUI gcrma GeneSpring affylmGUI
20.7 years ago SteffenMöller ▴ 30
0
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822
views
Affymetrix CDF package
cdf affylmGUI cdf affylmGUI
20.7 years ago MShingyoji@lbl.gov ▴ 10
0
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4
replies
1.9k
views
tkrplot in R2.0 on Mac OS X
affylmGUI affylmGUI
updated 20.9 years ago by ▴ 1000 • written 20.9 years ago by ▴ 100
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0
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832
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
21.0 years ago Gordon Smyth 53k
0
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0
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795
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
21.0 years ago Gareth Elvidge ▴ 10
0
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1
reply
1.3k
views
Re: Limma GUI exporting
Microarray limma affylmGUI limmaGUI Microarray limma affylmGUI limmaGUI
21.3 years ago James Wettenhall ▴ 1000
0
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0
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857
views
affylmGUI multiget
affylmGUI affylmGUI
21.3 years ago James Wettenhall ▴ 1000
0
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0
replies
884
views
affylmGUI fix (topTable/CDF name)
Annotation cdf affylmGUI Annotation cdf affylmGUI
21.3 years ago James Wettenhall ▴ 1000
0
votes
1
reply
1.2k
views
loading CEL files in affylmGUI
Annotation affylmGUI Annotation affylmGUI
updated 21.3 years ago by ▴ 1000 • written 21.3 years ago by ▴ 60
0
votes
3
replies
1.5k
views
Error in parse() loading affylmGUI
affylmGUI affylmGUI
updated 21.3 years ago by ▴ 1000 • written 21.3 years ago by ▴ 340
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0
replies
872
views
three way comparisons with affylmgui
affylmGUI affylmGUI
21.3 years ago Simon Kidd ▴ 180
0
votes
1
reply
942
views
affylmGUI
affylmGUI affylmGUI
updated 21.3 years ago by ▴ 1000 • written 21.3 years ago by ▴ 120
0
votes
1
reply
1.1k
views
Anopheles/malaria Affy chips
affy simpleaffy affylmGUI affy simpleaffy affylmGUI
updated 21.3 years ago by ▴ 950 • written 21.3 years ago by ▴ 510
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0
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1.3k
views
Re: affylmGUI
Genetics affylmGUI limmaGUI convert Genetics affylmGUI limmaGUI convert
21.4 years ago James Wettenhall ▴ 1000
0
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0
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929
views
gcrma in affylmGUI
gcrma affylmGUI limmaGUI gcrma affylmGUI limmaGUI
21.4 years ago James Wettenhall ▴ 1000
0
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0
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1.1k
views
limmaGUI & affylmGUI wizards for Windows & bug fixes
Microarray Genetics cdf affylmGUI limmaGUI Microarray Genetics cdf affylmGUI limmaGUI
21.4 years ago James Wettenhall ▴ 1000
0
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1
reply
919
views
Is rma in affylmGUI different to affy rma?
affy affylmGUI affy affylmGUI
21.4 years ago Simon Kidd ▴ 180
0
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2
replies
1.1k
views
affylmGUI
drosgenome1 affylmGUI drosgenome1 affylmGUI
updated 21.4 years ago by ▴ 1000 • written 21.4 years ago by ▴ 180
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807
views
Re: affylmGUI figures estrogen data set
GO affylmGUI GO affylmGUI
21.4 years ago James Wettenhall ▴ 1000
0
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0
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1.4k
views
BioC GUI development
Microarray Genetics GUI affy limma affylmGUI limmaGUI Microarray Genetics GUI affy
21.8 years ago James Wettenhall ▴ 1000
92 results • Page 2 of 2
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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