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Bioconductor Cloud AMI - How to Access Microarray Files Stored in Amazon S3 Buckets?
amazon
bioconductor aws
s3
oligo package
affybatch
7.4 years ago
perdedorium
• 0
2
votes
6
replies
2.0k
views
Enable copying Bioconductor AMI to new region
aws
bioconductor aws
ami
amazon
updated 7.9 years ago by
shepherl
4.2k • written 7.9 years ago by
neal
▴ 10
5
votes
2
replies
3.1k
views
Copying Amazon Bioconductor AMI to another zone
amazon
cloud
updated 8.9 years ago by
Valerie Obenchain
★ 6.8k • written 8.9 years ago by
Thomas Sandmann
▴ 90
0
votes
2
replies
2.0k
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How to launch a preconfigured Bioconductor AMI session using the free tier with RStudio Server?
bioconductor
amazon
ami
cloud
updated 9.1 years ago by
shepherl
4.2k • written 9.1 years ago by
kdkorthauer
• 0
0
votes
2
replies
1.7k
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Help with AMI hosted on bioconductor page, ami-a3d126c8
BiocParallel
amazon
10.0 years ago
nitesh.turaga
▴ 140
5 results • Page
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Comment: WGCNA analysis on RNAseq and proteoimcs data
by
sum31278
• 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning
by
inadequate.peacock.iiag
• 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design
by
Gordon Smyth
52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
Answer: ROAST compare results with complex design
by
James W. MacDonald
68k
You are specifying that the last column of your design should be used as the contrast. You should instead use `contrast[,1]`, which will us…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Yes. You can infer that by figuring out what each coefficient measures. Here is your design matrix: ``` > targets ID Name phase G…
Votes
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
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