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bootstrap
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reset
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Two Genotypes Four Treatments RNA-seq Analysis
salmon
rna-seq
swish
bootstrap
fishpond
updated 3.9 years ago by
Michael Love
43k • written 3.9 years ago by
samuelcjx
• 0
0
votes
6
replies
1.7k
views
tximport lose transcript names with Salmon bootstrap
salmon
tximport
bootstrap
updated 5.8 years ago by
julia.jefferson23
• 0 • written 5.8 years ago by
Cindy
• 0
0
votes
0
replies
1.4k
views
Using log2FC distance matrix in Boot.Phylo to create bootstrapped trees
tree
bootstrap
dgelist
plotmds
7.8 years ago
Larry K.
• 0
0
votes
0
replies
1.1k
views
Jackknifing/bootstrapping input and output question
jackknifing
R
microarray
bootstrap
8.5 years ago
bhgyu
▴ 30
1
vote
7
replies
2.1k
views
[GSVM] bootstrapping error
GSVM
bootstrap
snow
updated 9.0 years ago by
Robert Castelo
★ 3.4k • written 9.0 years ago by
mforde84
▴ 20
0
votes
1
reply
4.5k
views
ape - delete bootstrap values (node.labels) less than a certain value
ape
bootstrap
node
phylogenetic
tree
10.5 years ago
wd
▴ 30
0
votes
1
reply
2.1k
views
DESeq2 -- Bootstrap subsampling to estimate distribution of expression
deseq2
bootstrap
differential expression
updated 10.8 years ago by
Michael Love
43k • written 10.8 years ago by
David Eccles (gringer)
▴ 30
7 results • Page
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Comment: Limma-voom sample weights and impact on DEG numbers
by
rosarygaseous
• 0
I have faced similar issues before, and often the problem comes down to package versions or R/Bioconductor compatibility. Make sure your R …
Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Votes
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
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