Bioconductor Celegans

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481

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Celegans DESeq2 dds Errorinseq_len(length(idx)-1)

updated 18 months ago by James W. MacDonald 65k • written 18 months ago by Enzo.Scifo • 0

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972

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BSgenome Celegans

updated 2.1 years ago by Hervé Pagès 16k • written 2.1 years ago by Tsung-Han • 0

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1.6k

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Gviz celegans

updated 6.3 years ago by Robert Ivanek ▴ 730 • written 6.3 years ago by alex.gos90 ▴ 10

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1.4k

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biomaRt bioconductor celegans annotation

updated 6.3 years ago by Mike Smith ★ 6.5k • written 6.3 years ago by clarisbaby • 0

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758

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celegans affy convert celegans affy convert

updated 13.7 years ago by Marc Carlson ★ 7.2k • written 13.7 years ago by Julie Zhu ★ 4.3k

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977

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Transcription GO celegans BSgenome Biostrings BSgenome IRanges Transcription GO celegans

updated 14.3 years ago by Sean Davis 21k • written 14.3 years ago by Paul Shannon ★ 1.1k

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948

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celegans Biostrings celegans Biostrings

updated 15.5 years ago by Hervé Pagès 16k • written 15.5 years ago by Elizabeth Purdom ▴ 210

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873

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celegans celegans

17.1 years ago Gordon Smyth 50k

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701

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Microarray Cancer celegans drosgenome1 affy Microarray Cancer celegans drosgenome1 affy

20.6 years ago James W. MacDonald 65k

9 results • Page 1 of 1

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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180