Bioconductor Chromosome

Showing : chromosome • reset

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987

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gene chromosome proteincodinggene

21 months ago Liliian • 0

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2.4k

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GenomicRanges split chromosome TxDb

updated 3.1 years ago by Hervé Pagès 16k • written 3.1 years ago by jon.klonowski ▴ 40

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13k

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SNP rs id Biomart Chromosome coordinates

updated 18 months ago by James W. MacDonald 67k • written 4.4 years ago by Mahan • 0

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957

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Chromosome Annotation

updated 4.5 years ago by James W. MacDonald 67k • written 4.5 years ago by Bine ▴ 50

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1.0k

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tximport GCF feature table parsing error chromosome

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by knholm • 0

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696

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RefSeq Chromosome Mutalyzer

4.8 years ago heiko_kin ▴ 60

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642

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edgeR chromosome RNAseq

updated 4.8 years ago by swbarnes2 ★ 1.4k • written 4.8 years ago by missmoparker • 0

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963

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homo sapiens chromosome

updated 6.7 years ago by James W. MacDonald 67k • written 6.7 years ago by xchen8 • 0

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2.4k

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bsgenome chromosome reference genome

updated 6.9 years ago by Hervé Pagès 16k • written 6.9 years ago by Nathan Sheffield ▴ 10

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2.8k

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Gviz chromosome ideogram

updated 7.9 years ago by bernatgel ▴ 150 • written 7.9 years ago by dulunar ▴ 10

10 results • Page 1 of 1

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Answer: WGCNA sample-data preprocessing order by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. …

Answer: WGCNA: Can we use high power (26) for signed network? by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…

Answer: Ph.D. scholar by ATpoint ★ 4.6k

Hi, WGCNA is not a Bioconductor package, please read the documentation to get guidance. See https://support.bioconductor.org/p/9155561/. C…

Comment: Recount3 data correspond to TCGA data by Fep29 • 0

Hi, This the solution to mapping TCGA ids in Recount3 to the ids used in the TCGA barcodes: library(recount3) human_projects <- …

Answer: Unable to find sample sheet file for ChAMP methylation data analysis by James W. MacDonald 67k

There is an example file in the extdata directory of the `minfiData` package that you could emulate.

Votes

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

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