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0
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681
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Gviz: set colors for UTRs
plot
color
Gviz
utr
3.1 years ago
ginlucks
• 0
0
votes
3
replies
1.5k
views
Change color of Diffbind's PCA and clustered heatmap plot()
DiffBind
plot
color
updated 4.3 years ago by
Rory Stark
★ 5.2k • written 4.5 years ago by
melnuesch
▴ 10
0
votes
4
replies
6.9k
views
Limma Volcano Plot Highlight Top Genes by Color
limma
microarray
volcanoplot
color
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
dmm204
• 0
0
votes
2
replies
1.8k
views
Controlling colours assigned to order in DeSeq2 plot in phyloseq
phyloseq
color
ggplot2
updated 7.2 years ago by
Michael Love
41k • written 7.2 years ago by
sarahmacdonald86
• 0
1
vote
2
replies
1.2k
views
How can I set custom colors in DiffBind using dba.plotHeatmap
diffbind
color
updated 7.4 years ago by
Gord Brown
▴ 650 • written 7.4 years ago by
Gary
▴ 20
0
votes
1
reply
1.2k
views
HowTo? Provide a different fill color for each rectangle in an Gviz AnnotationTrack ?
Gviz
color
updated 7.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.7 years ago by
Malcolm Cook
★ 1.6k
0
votes
0
replies
996
views
Mixed up colors in GViz GeneRegionTrack
color
GeneRegionTrack
7.9 years ago
senanu.pearson
• 0
4
votes
2
replies
4.2k
views
DESeq2 color coding
DESeq2
color
R package
updated 8.0 years ago by
Mike Smith
★ 6.5k • written 8.0 years ago by
ChIP-Tease
• 0
2
votes
3
replies
2.3k
views
No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 8.3 years ago by
aaron
▴ 10 • written 8.3 years ago by
timothypyork
• 0
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Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Votes
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
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