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convert
•
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0
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0
replies
853
views
Problems of bioconductor-excel plug-in
convert
convert
19.8 years ago
Qi Zheng
▴ 10
0
votes
5
replies
1.7k
views
Boxplot from dataframe...
convert
convert
updated 19.8 years ago by
James W. MacDonald
68k • written 19.8 years ago by
David Ruau
▴ 110
0
votes
2
replies
1.2k
views
bug in overview function of made4
Biobase
affy
marray
convert
made4
Biobase
affy
marray
convert
made4
updated 19.9 years ago by
Aedin Culhane
▴ 510 • written 20.0 years ago by
Jenny Drnevich
★ 2.2k
0
votes
6
replies
1.5k
views
Gene names
convert
convert
updated 20.0 years ago by
Seth Falcon
★ 7.4k • written 20.0 years ago by
Narendra Kaushik
▴ 150
0
votes
1
reply
1.0k
views
converting data into logical matrix
convert
convert
updated 20.0 years ago by
Sean Davis
21k • written 20.0 years ago by
Assa Yeroslaviz
▴ 100
0
votes
0
replies
667
views
System configaration -Bioconductor for the best possible results (in terms of files processed)
gcrma
convert
gcrma
convert
20.1 years ago
Chaitanya Kommidi
▴ 30
0
votes
6
replies
2.6k
views
String manipulation: String to Command
convert
convert
updated 20.1 years ago by
rgentleman
★ 5.5k • written 20.1 years ago by
Mohammad Esad-Djou
▴ 520
0
votes
2
replies
1.1k
views
Lymphoma data package
convert
convert
updated 20.1 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 20.2 years ago by
Srinivas Iyyer
▴ 600
0
votes
1
reply
1.4k
views
finding affy_ID from genesymbol
convert
convert
updated 20.3 years ago by
Steffen Durinck
▴ 420 • written 20.3 years ago by
Andreas Zankl
▴ 80
0
votes
1
reply
850
views
normalizing incomplete arrays [was: limma errormessage]
Normalization
limma
convert
Normalization
limma
convert
updated 20.3 years ago by
Jianping Jin
▴ 890 • written 20.3 years ago by
Marcus Davy
▴ 680
0
votes
0
replies
841
views
marray intensity normalization?
Normalization
limma
marray
convert
Normalization
limma
marray
convert
20.4 years ago
Gordon Smyth
53k
0
votes
0
replies
850
views
marray intensity normalization?
marray
convert
marray
convert
20.4 years ago
Jacob Michaelson
▴ 320
0
votes
3
replies
1.2k
views
Resourcerer, Error in author[["authors"]]
convert
Resourcerer
convert
Resourcerer
updated 20.4 years ago by
Seth Falcon
★ 7.4k • written 20.4 years ago by
Morten
▴ 300
0
votes
3
replies
1.1k
views
AffyBatch to ProbeSet? SpikeIn and Hgu-133?
convert
convert
updated 20.5 years ago by
James W. MacDonald
68k • written 20.5 years ago by
Mohammad Esad-Djou
▴ 520
0
votes
0
replies
1.2k
views
the edgeNames( ), and the label for the edge in a node-edge plot created in Graphviz
graph
Rgraphviz
convert
graph
Rgraphviz
convert
20.5 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
1.1k
views
the edgeNames( ), and the label for the edge in a node-edge plot created in Graphviz
graph
convert
graph
convert
20.5 years ago
Yilin Liu
▴ 40
0
votes
0
replies
1.5k
views
convert a Binary CEL file to txt
GO
affy
convert
GO
affy
convert
20.6 years ago
James W. MacDonald
68k
0
votes
0
replies
2.1k
views
convert a Binary CEL file to txt
convert
convert
20.6 years ago
Mohammad Esad-Djou
▴ 520
0
votes
0
replies
941
views
Convert (altcdfenvs)CdfEnvAffy object to useable cdf package
cdf
probe
affy
convert
cdf
probe
affy
convert
20.7 years ago
Rhonda DeCook
▴ 90
0
votes
0
replies
700
views
Convert (altcdfenvs)CdfEnvAffy object to useable cdf package or environment?
cdf
affy
convert
cdf
affy
convert
20.7 years ago
Ken Termiso
▴ 250
0
votes
3
replies
1.4k
views
Converting annotate lists to a matrix
Annotation
hu6800
convert
Annotation
hu6800
convert
20.8 years ago
michael watson IAH-C
★ 3.4k
0
votes
0
replies
1.9k
views
Internationalization and localization of R
PROcess
convert
PROcess
convert
20.8 years ago
ripley@stats.ox.ac.uk
▴ 50
0
votes
0
replies
563
views
Soybean cdfenv
cdf
affy
convert
cdf
affy
convert
20.9 years ago
Ithal, Nagabhushana
▴ 20
0
votes
1
reply
635
views
Soybean CDFNV
cdf
affy
convert
cdf
affy
convert
updated 20.9 years ago by
James W. MacDonald
68k • written 20.9 years ago by
Ithal, Nagabhushana
▴ 20
0
votes
3
replies
1.3k
views
Using different processed data in limma package
limma
convert
limma
convert
updated 20.9 years ago by
Marcus Davy
▴ 680 • written 20.9 years ago by
宮本 真理
▴ 40
0
votes
1
reply
1.6k
views
kyte and doolittle hydropathy values/plot - sub + sliding window mean
graph
convert
graph
convert
21.0 years ago
Matthew Hannah
▴ 940
0
votes
0
replies
1.1k
views
limma single channel analysis
affy
convert
affy
convert
21.0 years ago
Ren Na
▴ 250
0
votes
1
reply
956
views
convert data object within Limma (.txt to RGlist)
limma
marray
convert
limma
marray
convert
updated 21.0 years ago by
michael watson IAH-C
★ 3.4k • written 21.0 years ago by
Caimiao Wei
▴ 100
0
votes
0
replies
951
views
calling SAM using siggenes package
convert
convert
21.0 years ago
Aedin Culhane
▴ 310
0
votes
1
reply
2.1k
views
How do I get p-values from multtest?
multtest
convert
multtest
convert
updated 21.1 years ago by
Yongchao Ge
▴ 10 • written 21.1 years ago by
michael watson IAH-C
★ 3.4k
0
votes
0
replies
851
views
affy and limma
Normalization
affy
affylmGUI
convert
Normalization
affy
affylmGUI
convert
21.1 years ago
Gordon Smyth
53k
0
votes
0
replies
806
views
affy and limma
Normalization
affy
affylmGUI
convert
Normalization
affy
affylmGUI
convert
21.1 years ago
Gareth Elvidge
▴ 10
0
votes
0
replies
1.2k
views
Unexpected results using limma with numerical factor - regression intercept?
GO
Regression
limma
convert
GO
Regression
limma
convert
21.2 years ago
Gordon Smyth
53k
0
votes
0
replies
1.3k
views
Re: [R] How to convert a vector into a list
convert
convert
21.2 years ago
Adaikalavan Ramasamy
★ 1.8k
0
votes
0
replies
893
views
Annotate Package: How do I get the gene names and how do I write my matrix
Microarray
Annotation
Cancer
annaffy
convert
Microarray
Annotation
Cancer
annaffy
convert
21.2 years ago
James W. MacDonald
68k
0
votes
0
replies
1.2k
views
Agilent microarray
Microarray
Normalization
convert
Microarray
Normalization
convert
21.3 years ago
s-uchida
▴ 20
0
votes
3
replies
2.2k
views
qvalues, sam, limma
affy
limma
convert
affy
limma
convert
21.4 years ago
Naomi Altman
★ 6.0k
0
votes
0
replies
1.3k
views
Re: affylmGUI
Genetics
affylmGUI
limmaGUI
convert
Genetics
affylmGUI
limmaGUI
convert
21.4 years ago
James Wettenhall
▴ 1000
0
votes
1
reply
729
views
marrayNorm to exprSet
convert
convert
updated 21.5 years ago by
James Wettenhall
▴ 1000 • written 21.5 years ago by
michael watson IAH-C
★ 3.4k
0
votes
1
reply
1.0k
views
RE: venn diagram
convert
convert
updated 21.6 years ago by
Arne.Muller@aventis.com
▴ 620 • written 21.6 years ago by
Patrick Cahan
▴ 20
0
votes
1
reply
1.1k
views
reading in a text file
convert
convert
updated 21.7 years ago by
Tom R. Fahland
▴ 60 • written 21.7 years ago by
Jamila Ahdidan
▴ 30
0
votes
1
reply
928
views
installing affy devel package
GO
affy
convert
GO
affy
convert
21.7 years ago
Ben Bolstad
★ 1.1k
0
votes
0
replies
946
views
installing affy devel package
GO
affy
convert
GO
affy
convert
21.7 years ago
Isaac Mehl
▴ 60
0
votes
0
replies
1.3k
views
Question about excluding Affymetrix spike controls from normalization
Normalization
Bacillus subtilis
convert
Normalization
Bacillus subtilis
convert
21.7 years ago
Tan, MinHan
▴ 180
0
votes
2
replies
1.1k
views
Re: FW: makeProbePackage problems?
Cancer
probe
reposTools
convert
Cancer
probe
reposTools
convert
updated 21.8 years ago by
Matthew Hannah
▴ 940 • written 21.8 years ago by
Wolfgang Huber
★ 13k
0
votes
0
replies
1.1k
views
Re: [Fwd: Bioc Book Chapter] (Gordon K Smyth) Biocondu ctor Digest, Vol 11, Issue 38
Microarray
Preprocessing
limma
marray
convert
oligo
Microarray
Preprocessing
limma
marray
21.8 years ago
michael watson IAH-C
★ 3.4k
0
votes
0
replies
996
views
Re: [Fwd: Bioc Book Chapter] (Gordon K Smyth) Bioconductor Digest, Vol 11, Issue 38
Microarray
Preprocessing
limma
marray
convert
oligo
Microarray
Preprocessing
limma
marray
21.8 years ago
Christopher Wilkinson
▴ 140
0
votes
0
replies
1.0k
views
Creating an exprSet from two comma deliminated text files
convert
convert
21.9 years ago
John E. Cornell, Ph.D.
▴ 150
0
votes
0
replies
1.0k
views
cdf package for new Human Genome U133 Plus 2.0 Array ?
cdf
convert
cdf
convert
21.9 years ago
Srikanth
▴ 40
0
votes
0
replies
989
views
Fwd: Re: Fwd: Re: Clustering in R....
Visualization
Clustering
convert
Visualization
Clustering
convert
22.0 years ago
Marcus
▴ 150
462 results • Page
9 of 10
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Matthew Thornton
▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated
by
RalphSavage99
• 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2
by
shepherl
4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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