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853
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Problems of bioconductor-excel plug-in
convert convert
19.8 years ago Qi Zheng ▴ 10
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5
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1.7k
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Boxplot from dataframe...
convert convert
updated 19.8 years ago by 68k • written 19.8 years ago by ▴ 110
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2
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1.2k
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bug in overview function of made4
Biobase affy marray convert made4 Biobase affy marray convert made4
updated 19.9 years ago by ▴ 510 • written 20.0 years ago by ★ 2.2k
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6
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1.5k
views
Gene names
convert convert
updated 20.0 years ago by ★ 7.4k • written 20.0 years ago by ▴ 150
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1
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1.0k
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converting data into logical matrix
convert convert
updated 20.0 years ago by 21k • written 20.0 years ago by ▴ 100
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0
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667
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System configaration -Bioconductor for the best possible results (in terms of files processed)
gcrma convert gcrma convert
20.1 years ago Chaitanya Kommidi ▴ 30
0
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6
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2.6k
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String manipulation: String to Command
convert convert
updated 20.1 years ago by ★ 5.5k • written 20.1 years ago by ▴ 520
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2
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1.1k
views
Lymphoma data package
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updated 20.1 years ago by ★ 1.8k • written 20.2 years ago by ▴ 600
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1
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1.4k
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finding affy_ID from genesymbol
convert convert
updated 20.3 years ago by ▴ 420 • written 20.3 years ago by ▴ 80
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1
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850
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normalizing incomplete arrays [was: limma errormessage]
Normalization limma convert Normalization limma convert
updated 20.3 years ago by ▴ 890 • written 20.3 years ago by ▴ 680
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841
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marray intensity normalization?
Normalization limma marray convert Normalization limma marray convert
20.4 years ago Gordon Smyth 53k
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0
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850
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marray intensity normalization?
marray convert marray convert
20.4 years ago Jacob Michaelson ▴ 320
0
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3
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1.2k
views
Resourcerer, Error in author[["authors"]]
convert Resourcerer convert Resourcerer
updated 20.4 years ago by ★ 7.4k • written 20.4 years ago by ▴ 300
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3
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1.1k
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AffyBatch to ProbeSet? SpikeIn and Hgu-133?
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updated 20.5 years ago by 68k • written 20.5 years ago by ▴ 520
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0
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1.2k
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the edgeNames( ), and the label for the edge in a node-edge plot created in Graphviz
graph Rgraphviz convert graph Rgraphviz convert
20.5 years ago Seth Falcon ★ 7.4k
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1.1k
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the edgeNames( ), and the label for the edge in a node-edge plot created in Graphviz
graph convert graph convert
20.5 years ago Yilin Liu ▴ 40
0
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0
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1.5k
views
convert a Binary CEL file to txt
GO affy convert GO affy convert
20.6 years ago James W. MacDonald 68k
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0
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2.1k
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convert a Binary CEL file to txt
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20.6 years ago Mohammad Esad-Djou ▴ 520
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0
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941
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Convert (altcdfenvs)CdfEnvAffy object to useable cdf package
cdf probe affy convert cdf probe affy convert
20.7 years ago Rhonda DeCook ▴ 90
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0
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700
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Convert (altcdfenvs)CdfEnvAffy object to useable cdf package or environment?
cdf affy convert cdf affy convert
20.7 years ago Ken Termiso ▴ 250
0
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3
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1.4k
views
Converting annotate lists to a matrix
Annotation hu6800 convert Annotation hu6800 convert
20.8 years ago michael watson IAH-C ★ 3.4k
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0
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1.9k
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Internationalization and localization of R
PROcess convert PROcess convert
20.8 years ago ripley@stats.ox.ac.uk ▴ 50
0
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0
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563
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Soybean cdfenv
cdf affy convert cdf affy convert
20.9 years ago Ithal, Nagabhushana ▴ 20
0
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1
reply
635
views
Soybean CDFNV
cdf affy convert cdf affy convert
updated 20.9 years ago by 68k • written 20.9 years ago by ▴ 20
0
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3
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1.3k
views
Using different processed data in limma package
limma convert limma convert
updated 20.9 years ago by ▴ 680 • written 20.9 years ago by ▴ 40
0
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1
reply
1.6k
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kyte and doolittle hydropathy values/plot - sub + sliding window mean
graph convert graph convert
21.0 years ago Matthew Hannah ▴ 940
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0
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1.1k
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limma single channel analysis
affy convert affy convert
21.0 years ago Ren Na ▴ 250
0
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1
reply
956
views
convert data object within Limma (.txt to RGlist)
limma marray convert limma marray convert
updated 21.0 years ago by ★ 3.4k • written 21.0 years ago by ▴ 100
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0
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951
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calling SAM using siggenes package
convert convert
21.0 years ago Aedin Culhane ▴ 310
0
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1
reply
2.1k
views
How do I get p-values from multtest?
multtest convert multtest convert
updated 21.1 years ago by ▴ 10 • written 21.1 years ago by ★ 3.4k
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0
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851
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
21.1 years ago Gordon Smyth 53k
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0
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806
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affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
21.1 years ago Gareth Elvidge ▴ 10
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0
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1.2k
views
Unexpected results using limma with numerical factor - regression intercept?
GO Regression limma convert GO Regression limma convert
21.2 years ago Gordon Smyth 53k
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0
replies
1.3k
views
Re: [R] How to convert a vector into a list
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21.2 years ago Adaikalavan Ramasamy ★ 1.8k
0
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0
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893
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Annotate Package: How do I get the gene names and how do I write my matrix
Microarray Annotation Cancer annaffy convert Microarray Annotation Cancer annaffy convert
21.2 years ago James W. MacDonald 68k
0
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0
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1.2k
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Agilent microarray
Microarray Normalization convert Microarray Normalization convert
21.3 years ago s-uchida ▴ 20
0
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3
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2.2k
views
qvalues, sam, limma
affy limma convert affy limma convert
21.4 years ago Naomi Altman ★ 6.0k
0
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0
replies
1.3k
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Re: affylmGUI
Genetics affylmGUI limmaGUI convert Genetics affylmGUI limmaGUI convert
21.4 years ago James Wettenhall ▴ 1000
0
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1
reply
729
views
marrayNorm to exprSet
convert convert
updated 21.5 years ago by ▴ 1000 • written 21.5 years ago by ★ 3.4k
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1
reply
1.0k
views
RE: venn diagram
convert convert
updated 21.6 years ago by ▴ 620 • written 21.6 years ago by ▴ 20
0
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1
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1.1k
views
reading in a text file
convert convert
updated 21.7 years ago by ▴ 60 • written 21.7 years ago by ▴ 30
0
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1
reply
928
views
installing affy devel package
GO affy convert GO affy convert
21.7 years ago Ben Bolstad ★ 1.1k
0
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0
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946
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installing affy devel package
GO affy convert GO affy convert
21.7 years ago Isaac Mehl ▴ 60
0
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0
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1.3k
views
Question about excluding Affymetrix spike controls from normalization
Normalization Bacillus subtilis convert Normalization Bacillus subtilis convert
21.7 years ago Tan, MinHan ▴ 180
0
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2
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1.1k
views
Re: FW: makeProbePackage problems?
Cancer probe reposTools convert Cancer probe reposTools convert
updated 21.8 years ago by ▴ 940 • written 21.8 years ago by ★ 13k
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0
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1.1k
views
Re: [Fwd: Bioc Book Chapter] (Gordon K Smyth) Biocondu ctor Digest, Vol 11, Issue 38
Microarray Preprocessing limma marray convert oligo Microarray Preprocessing limma marray
21.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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996
views
Re: [Fwd: Bioc Book Chapter] (Gordon K Smyth) Bioconductor Digest, Vol 11, Issue 38
Microarray Preprocessing limma marray convert oligo Microarray Preprocessing limma marray
21.8 years ago Christopher Wilkinson ▴ 140
0
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0
replies
1.0k
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Creating an exprSet from two comma deliminated text files
convert convert
21.9 years ago John E. Cornell, Ph.D. ▴ 150
0
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0
replies
1.0k
views
cdf package for new Human Genome U133 Plus 2.0 Array ?
cdf convert cdf convert
21.9 years ago Srikanth ▴ 40
0
votes
0
replies
989
views
Fwd: Re: Fwd: Re: Clustering in R....
Visualization Clustering convert Visualization Clustering convert
22.0 years ago Marcus ▴ 150
462 results • Page 9 of 10
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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Scholar to shepherl 4.2k
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