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copywriteR
•
reset
0
votes
2
replies
841
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
20 months ago
fer_talavera
• 0
0
votes
1
reply
945
views
CopywriteR output
CopywriteR
updated 20 months ago by
fer_talavera
• 0 • written 4.1 years ago by
Joshua
• 0
2
votes
4
replies
1.4k
views
CopywriteR job runs out of memory
copywriter
cnv
updated 5.6 years ago by
oscarkrijgsman
▴ 20 • written 5.6 years ago by
Ram
▴ 220
0
votes
1
reply
1.4k
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 7.2 years ago by
t.kuilman
▴ 170 • written 7.2 years ago by
magdaaverte
• 0
3
votes
12
replies
3.0k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
TriS
▴ 200
1
vote
2
replies
2.2k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.5k
views
Problems with CopywriteR
copywriter
updated 8.7 years ago by
t.kuilman
▴ 170 • written 8.7 years ago by
filipzembol
• 0
0
votes
1
reply
2.2k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 9.4 years ago by
t.kuilman
▴ 170 • written 9.4 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.9k
views
CopywriteR error: "Error in .Method"
CopywriteR
9.4 years ago
Tom
▴ 10
1
vote
3
replies
1.9k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 9.5 years ago by
t.kuilman
▴ 170 • written 9.5 years ago by
thestaroceanster
• 0
3
votes
3
replies
4.7k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
jcarter
• 0
2
votes
4
replies
3.0k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
jcarter
• 0
1
vote
2
replies
1.7k
views
Copywriter output looks strange
copywriter
9.8 years ago
MatthewGField
▴ 10
2
votes
9
replies
3.4k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.9 years ago by
smcnulty
• 0
0
votes
7
replies
2.7k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
smcnulty
• 0
0
votes
1
reply
1.8k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
sshung
• 0
2
votes
1
reply
1.7k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 9.9 years ago by
t.kuilman
▴ 170 • written 9.9 years ago by
Felix
• 0
17 results • Page
1 of 1
Recent ...
Replies
Comment: Bioinformatician at the Lausanne University Hospital
by
eja.ger.m
• 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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