Bioconductor Cran

Showing : cran • reset

votes

replies

1.3k

views

mran docker cran

updated 2.8 years ago by James W. MacDonald 67k • written 2.8 years ago by mk ▴ 20

vote

691

views

Bioconductor CRAN

updated 3.5 years ago by Mike Smith ★ 6.6k • written 3.5 years ago by Butui • 0

vote

replies

2.7k

views

cran biocinstaller biocmanager

updated 6.0 years ago by Martin Morgan 25k • written 6.1 years ago by Kevin Ushey ▴ 130

votes

1.2k

views

cran package development dependencies

updated 6.1 years ago by Peter Langfelder ★ 3.0k • written 6.1 years ago by bjgrant • 0

votes

replies

2.2k

views

r cran

updated 10.0 years ago by Henrik Bengtsson ★ 2.4k • written 10.0 years ago by mattocci27 • 0

vote

3.1k

views

samr rnaseq CRAN

updated 10.1 years ago by Martin Morgan 25k • written 10.1 years ago by aristotele_m ▴ 40

6 results • Page 1 of 1

Recent ...

Replies

Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k

Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…

Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0

Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k

You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…

Answer: HilBertVis install error by James W. MacDonald 67k

It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…

Comment: Identical samples after deseq2 batch effect removal by maripane • 0

Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…

Votes

A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

A: correcting the batch effects in Limma and SVA

A: Using of limma moderated t-test with "corrected" expression matrix resulting fr

Awards • All

Popular Question to alexandre.blais ▴ 50