Showing : package development • reset
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Best practices for CRAN package calling a Bioconductor package function
cran package development dependencies
updated 2.5 years ago by ★ 2.6k • written 2.5 years ago by • 0
0
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2
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416
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Circular dependencies between data and software packages: how best to avoid
developers bioc-devel package development circular dependencies
updated 2.6 years ago by 2.7k • written 2.6 years ago by ★ 4.2k
1
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1
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388
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Strange problem in example check of package
package development r package problem build/check error mmappr2
2.6 years ago Kyle Johnsen ▴ 20
3
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5
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626
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"RNASeqWorkflow" package development question
package development
updated 2.7 years ago by 25k • written 2.7 years ago by • 0
2
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2
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619
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Size limit of external data
package development size limit external data
updated 3.1 years ago by ★ 26k • written 3.1 years ago by ▴ 20
1
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5
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738
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Tissue Specificity R-package
tissue specificity r package package development
updated 3.2 years ago by ▴ 130 • written 3.2 years ago by ▴ 20
0
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2
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1.5k
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Error in file.choose() : file choice cancelled
package development bioconductor rstudio rmarkdown vignettes
3.5 years ago clarisbaby • 0
0
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3
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1.5k
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warning: example doesn't exist; while trying to build a package
bioconductor package development R roxygen2 warning
3.5 years ago clarisbaby • 0
0
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1
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523
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Advice on finding: "1 lines (0%) are > 80 characters long" - my last BiocCheck NOTE
bioccheck package development
3.5 years ago Paul Brennan ▴ 10
6
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3
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1.1k
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How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck roxygen2 warning bioc-devel package development
updated 3.5 years ago by ▴ 640 • written 3.5 years ago by ▴ 10
1
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3
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754
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Access to github repository- how does one know if their ssh public key was accepted
github package updates developers package development
3.6 years ago rtraborn • 0
0
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0
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1.1k
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Tutorial: Using Subversion to update /devel branch of Bioconductor package
subversion bioc-devel package development usedevel Tutorial
3.8 years ago Bohdan Khomtchouk ▴ 10
0
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0
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560
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Job: Postdoc Position in Genome Data Science
job position next-generation sequencing package development Job
3.8 years ago Thomas Girke ★ 1.7k
13 results • Page 1 of 1
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Comment: Unable to annotate in ChIPQC using yeast genome by Zender • 0
`CQCanalysis = ChIPQC(samples, annotation="customAnno")` I think you could remove quotation marks, and following command will works. `CQC…
Comment: Retrieve loadings/eigenvalues for PCAs using DiffBind's dba.plotPCA by Spendlove • 0
Thanks Rory!! In future versions of the software it might be helpful to be able to retrieve the computed PCA data, but this will work. :) …
Answer: LOC gene IDs for characterised genes in annotation files by James W. MacDonald 56k
The `TxDb` objects are intended to provide genomic positions for genes/exons/transcripts/etc. They are not intended to provide other non-po…
Comment: Error in conversion of SCE object to Seurat Object. by Nadine • 0
Even if this might not be the correct platform to ask about this I just though I could share that I got exactly the same error and ensuring…
Answer: Retrieve loadings/eigenvalues for PCAs using DiffBind's dba.plotPCA by Rory Stark ★ 3.9k
`DiffBind` does allow any components to be plotted again any other components by specifying which components to plot using `components=` wh…
Votes
Answer: Effect of feature number on adjusted p-values
Answer: Effect of feature number on adjusted p-values
A: How to generate a PCA scree plot in DESeq2?
C: How to generate a PCA scree plot in DESeq2?
Answer: Retrieve loadings/eigenvalues for PCAs using DiffBind's dba.plotPCA
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