Showing : ddCt • reset
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Use ddCT with gene specific efficiencies?
ddCt efficiency gene specific efficiencies
updated 2.2 years ago by ▴ 120 • written 2.2 years ago by • 0
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2
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338
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Support for import of custom matrix data in the ddCt R package
ddCt import analysis R qRTPCR
updated 2.8 years ago by ▴ 120 • written 2.8 years ago by ▴ 10
1
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4
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1.2k
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ddCT Package for StepOnePlus qPCR output
qPCR ddCt geneexpression
updated 4.8 years ago by ▴ 120 • written 4.8 years ago by ▴ 60
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3
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1.7k
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ddCt calculation using bioconductor package
ddct qPCR
updated 11 months ago by ▴ 50 • written 7.2 years ago by ▴ 40
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1.6k
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reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
8.0 years ago Guest User ★ 12k
2
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1
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HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
8.2 years ago Cornwell, Adam ▴ 110
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ddCt calculation and statistics
qPCR ddCt qPCR ddCt
8.7 years ago Guest User ★ 12k
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841
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HTqPCR
convert qpcrNorm ddCt HTqPCR ReadqPCR convert qpcrNorm ddCt HTqPCR ReadqPCR
9.2 years ago Guest User ★ 12k
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1.2k
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HTqPCR
qPCR limma ddCt HTqPCR qPCR limma ddCt HTqPCR
9.7 years ago Heidi Dvinge ★ 2.0k
0
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HTqPCR problem with replicates
ddCt HTqPCR ddCt HTqPCR
updated 10.3 years ago by ★ 2.0k • written 10.4 years ago by ▴ 320
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ddCt isn't working with exported ABI7500-RT-PACR file
convert ddCt convert ddCt
updated 10.5 years ago by ▴ 300 • written 10.5 years ago by ▴ 20
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845
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doubt in HTqPCR
Cancer ddCt cycle HTqPCR ASSIGN Cancer ddCt cycle HTqPCR ASSIGN
10.7 years ago Heidi Dvinge ★ 2.0k
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Comment: performing the differential binding in ChIP-seq by ATpoint ★ 1.2k
Cross-posted https://www.biostars.org/p/9524012/#9524012
Comment: Transcript-level differential expression using DESeq2 by Ekta • 0
Yes, i tried that. I used salmon bootstraps also for the same RNAseq data to run Swish and performed the Differential transcript expressio…
Comment: how to make a group to apply the data to CAMERA by Akira • 0
Thank you so much for your quick answer!! I will look into them! I appreciate your kind support.
Comment: performing the differential binding in ChIP-seq by Bogdan ▴ 640
I am asking the question because we have two sets of ChIP-seq data for a histone mark (lets' say H3K4me1) that were generated with : <> an…
Comment: performing the differential binding in ChIP-seq by Bogdan ▴ 640
Thank you. Yes, DiffBind might be a good choice shall we have replicates per sample. Another choice is MA-norm2. Any other well-tested sug…
Votes
Answer: how to make a group to apply the data to CAMERA
Answer: how to make a group to apply the data to CAMERA
Comment: Using vegan::betadisper for determing if I subset my design for DESeq2
Answer: How to best visualize multi-level transcriptomics experiment data?
A: Interpreting results of sample-to-sample PCA/clustering and changing assignment
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