Bioconductor Dendrogram

Showing : dendrogram • reset

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4.7k

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dendrogram hclust textanalysis R RStudio

4.7 years ago • updated 4.6 years ago Abby ▴ 10

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3.6k

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pheatmap hclust R dendrogram

8.5 years ago vd4mmind • 0

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4.4k

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complexheatmap heatmap.2 dendrogram dendextend heatmap

updated 9.1 years ago by jokergoo ▴ 200 • written 9.1 years ago by enricoferrero ▴ 680

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4.8k

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wgcna dendrogram network hclust

updated 11.2 years ago by Keith Hughitt ▴ 180 • written 11.2 years ago by Jon Bråte ▴ 270

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4.3k

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wgcna hclust plotdendroandcolors dendrogram

updated 11.2 years ago by James W. MacDonald 68k • written 11.2 years ago by Keith Hughitt ▴ 180

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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