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hclust
•
reset
1
vote
7
replies
5.0k
views
Error with hclust
dendrogram
hclust
textanalysis
R
RStudio
4.9 years ago
Abby
▴ 10
1
vote
4
replies
2.2k
views
Difference in PCA variance calculation in DESeq2
deseq2
pca
hclust
updated 6.4 years ago by
Michael Love
43k • written 6.4 years ago by
Arindam
▴ 80
0
votes
1
reply
2.7k
views
Observation/case weighting in cluster analysis in R
hclust
hierarchical clustering
clustering
weight
updated 8.6 years ago by
Aaron Lun
★ 29k • written 8.6 years ago by
danielle.newby
• 0
0
votes
1
reply
3.8k
views
How to extract the distrances of the column dendrogram from pheatmap and just plot them with the distance scale?
pheatmap
hclust
R
dendrogram
8.8 years ago
vd4mmind
• 0
0
votes
3
replies
2.2k
views
WGCNA crashes R on OSX
WGCNA
hclust
8.9 years ago
bag59
• 0
0
votes
1
reply
2.1k
views
heatmap.2 reorder branches
heatmap.2
hclust
reorderfun
updated 9.0 years ago by
James W. MacDonald
68k • written 9.0 years ago by
b.nota
▴ 370
0
votes
1
reply
2.2k
views
Microarray time-course clustering, using "hclust" in masigPro
clustering
hclust
maSigPro
updated 10.0 years ago by
efejiroe
• 0 • written 10.6 years ago by
dimitri.leonid.lindenwald
▴ 50
1
vote
2
replies
3.0k
views
Supervised clustering by sample
hclust
heatmap
11.0 years ago
rmgreer
• 0
1
vote
2
replies
4.9k
views
Rearrange dendrogram to match merged modules in WGCNA?
wgcna
dendrogram
network
hclust
updated 11.4 years ago by
Keith Hughitt
▴ 180 • written 11.4 years ago by
Jon Bråte
▴ 270
0
votes
1
reply
4.5k
views
Plotting an hclust sub-tree in WGCNA?
wgcna
hclust
plotdendroandcolors
dendrogram
updated 11.4 years ago by
James W. MacDonald
68k • written 11.4 years ago by
Keith Hughitt
▴ 180
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Answer: Unable to find ENTREZ IDs
by
James W. MacDonald
68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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