Biostar Hclust

Showing : hclust • reset

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312

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dendrogram hclust textanalysis R RStudio

3 months ago Abby ▴ 10

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288

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deseq2 pca hclust

updated 21 months ago by Michael Love 33k • written 21 months ago by ag1805x ▴ 50

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1.1k

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hclust hierarchical clustering clustering weight

updated 4.0 years ago by Aaron Lun ★ 27k • written 4.0 years ago by danielle.newby • 0

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1.4k

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pheatmap hclust R dendrogram

4.2 years ago vd4mmind • 0

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813

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WGCNA hclust

4.3 years ago bag59 • 0

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1.1k

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heatmap.2 hclust reorderfun

updated 4.4 years ago by James W. MacDonald 57k • written 4.4 years ago by b.nota ▴ 340

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1.0k

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clustering hclust maSigPro

updated 5.4 years ago by efejiroe • 0 • written 6.0 years ago by dimitri.leonid.lindenwald ▴ 50

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1.7k

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hclust heatmap

6.4 years ago rmgreer • 0

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2.8k

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wgcna dendrogram network hclust

updated 6.8 years ago by Keith Hughitt ▴ 140 • written 6.8 years ago by Jon Bråte ▴ 180

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2.6k

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wgcna hclust plotdendroandcolors dendrogram

updated 6.8 years ago by James W. MacDonald 57k • written 6.8 years ago by Keith Hughitt ▴ 140

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Comment: cannot install edgeR on M1 Mac by noname88 • 0

Hi--I recommend seeing the suggestions in response to this post. It solved ALL of my problems with this type of installation! https://sta…

Comment: Using R BioMart getting orthologus genes between two species by Kevin Blighe 3.2k

Then, I think that *biomaRt* may not be what you want, but you tagged it in your post (?) Take a look at the Ensembl REST APIs (in particul…

Answer: Interaction using a single factor model DESeq2 by Michael Love 33k

Unfortunately, I have to save my time to address software related questions. For questions about how to set up your statistical analysis, I…

Comment: Deseq paired samples by Michael Love 33k

Oh if you are interested in comparing FUS vs NEG in the above sample order, you should define `replicate` as `factor(c(1,2,1,2,3,4,3,4))` a…

Answer: [DESeq2] Question regarding experiment design with multiple nesting and variable by Michael Love 33k

*"I would like to compare the different "cell types" against each other while taking into account the "patient" and the "disease" effect."*…

Votes

Answer: problems about installation of package ‘Rhtslib’, ‘Rsamtools’ ,‘GenomicAlignmen

Answer: cannot install edgeR on M1 Mac

Comment: How can I use geom_label_repel with EnhancedVolcano?

Comment: WGCNA coupled with differential expression analysis: question about baseline mod

Awards • All

Teacher to Guido Hooiveld ★ 3.0k

Scholar to Michael Love 33k