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duplicate
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GenomicInteractions duplicate annotations
duplicate
GenomicInteractions
4.0 years ago
dogancan
• 0
1
vote
3
replies
3.0k
views
duplicated row names when creating DESeqDataSetFromMatrix
deseq2
DESeqDataSetFromMatrix
duplicate
updated 6.1 years ago by
James W. MacDonald
65k • written 6.1 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
4
replies
1.4k
views
calling combineFeatures twice causes duplicate row.names
msnbase
duplicate
rforproteomics
updated 6.3 years ago by
Laurent Gatto
1.6k • written 6.3 years ago by
joris.vanhoutven
▴ 10
2
votes
1
reply
1.4k
views
How to remmove duplicated paired end alignments
alignment
duplicate
updated 7.3 years ago by
Aaron Lun
★ 28k • written 7.3 years ago by
Frocha
▴ 20
3
votes
16
replies
4.2k
views
Any way to proceed duplicate removal for list of GRanges object ?
r
grangeslist
duplicate
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
Jurat Shahidin
▴ 80
3
votes
3
replies
2.0k
views
getBM function, search for annotation characteristics with entrezgene filters --> result with duplicates
getBM
entrez gene identifiers
duplicate
rnaseq
7.3 years ago
Jose Luis Soto Vázquez
• 0
6 results • Page
1 of 1
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Comment: Method to find pathways different between 2 groups
by
Chris
• 0
Sorry for not clear. I just try to find papers use this method for learning purpose.
Comment: Improving the design matrices vignette in RNAseq123
by
Lluís Revilla Sancho
▴ 730
Cool. Thanks for looking into it.
Comment: Couldn't connect to server while using "pathways"
by
ATpoint
★ 4.1k
Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…
Answer: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…
Votes
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
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