Bioconductor Ensemble mart

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biomart ensemblbiomart ensemble mart

6.7 years ago emmak ▴ 20

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ensembl ensemble mart ensembl mart biomart News

8.0 years ago amonida ▴ 20

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biomart regulatory ensemble mart ensembldb

updated 8.4 years ago by Thomas Maurel ▴ 800 • written 8.4 years ago by Sigve Nakken ▴ 50

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biomart ensemble mart

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by andrew.j.skelton73 ▴ 370

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biomart ensembl ensemble mart entrez gene identifiers

8.8 years ago serpalma.v ▴ 60

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ensemble mart ensembl biomart ensembl release News

9.0 years ago amonida ▴ 20

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R biomart ensemble mart

updated 9.0 years ago by Hervé Pagès 16k • written 9.0 years ago by Gabriela Santos • 0

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Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k

Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…

Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0

Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k

You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…

Answer: HilBertVis install error by James W. MacDonald 67k

It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…

Comment: Identical samples after deseq2 batch effect removal by maripane • 0

Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…

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A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

A: correcting the batch effects in Limma and SVA

A: Using of limma moderated t-test with "corrected" expression matrix resulting fr

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