Bioconductor Ensemble mart

Showing : ensemble mart • reset

votes

1.1k

views

biomart ensemblbiomart ensemble mart

5.7 years ago emmak ▴ 20

votes

replies

990

views

ensembl ensemble mart ensembl mart biomart News

7.0 years ago amonida ▴ 20

votes

replies

975

views

biomart regulatory ensemble mart ensembldb

updated 7.5 years ago by Thomas Maurel ▴ 800 • written 7.5 years ago by Sigve Nakken ▴ 50

votes

replies

1.4k

views

biomart ensemble mart

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by andrew.j.skelton73 ▴ 370

votes

replies

1.1k

views

biomart ensembl ensemble mart entrez gene identifiers

7.8 years ago serpalma.v ▴ 60

votes

replies

1.5k

views

ensemble mart ensembl biomart ensembl release News

8.0 years ago amonida ▴ 20

vote

replies

2.2k

views

R biomart ensemble mart

updated 8.1 years ago by Hervé Pagès 16k • written 8.1 years ago by Gabriela Santos • 0

7 results • Page 1 of 1

Recent ...

Replies

Answer: WGCNA documentation not available by James W. MacDonald 64k

Although people sometimes ask questions about WGCNA on this support site, it's not a Bioconductor package and therefore off-topic. Peter La…

Comment: ATACseqQC shiftGAlignmentsList() problem by Ou, Jianhong ★ 1.3k

try: `gal1 <- shiftGAlignmentsList(gal, outbam='3-AL1_Tn5_shift.bam')`. I will try to figure out why the memory is so high.

Comment: ATACseqQC shiftGAlignmentsList() problem by jfmay • 0

Thanks for your response. The version of ATACseqQC I'm using is 1.26.0. I tried to set bigFile=TRUE. The resulting object *gal1* still ends…

Answer: biomaRt_getBM_Failed to collect lazy table by James W. MacDonald 64k

That's an old bug that you should be able to fix by updating. I can't remember what package, although `db_collect` comes from `dbplyr` (and…

Comment: rDGIdb package inconsistency with web interface by christopherjamessteel1990 • 0

I went on https://www.dgidb.org/api and searched "RPS3A" and got the below result. Not sure how you got something different. There is certa…

Votes

Comment: DESeq2 - batch, condition and tissue information

Answer: ScRNAseq analysis scran :: quickcluster Error

Comment: Ensembl down???

Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and

Comment: Ensembl down???

Awards • All