Showing : flowSOM • reset
0
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2
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377
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FlowSOM library requires igraph but igraph does not install
FlowSOM
written 6 months ago by • 0
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2
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712
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FlowSOM error system.file()
FlowSOM
updated 15 months ago by ▴ 360 • written 15 months ago by • 0
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0
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509
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Identifying populations within a FlowSOM tree
FlowSOM
15 months ago agus_rizzo • 0
1
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3
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1.1k
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FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 15 months ago by ▴ 360 • written 15 months ago by • 0
1
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1
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760
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FlowSOM with unrelated channels
FlowSOM cytofWorkflow
updated 23 months ago by ▴ 70 • written 23 months ago by • 0
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983
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Job: Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace CytoGLMM FlowSOM
3.2 years ago hbolouri • 0
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2
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1.1k
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FlowSOM dependencies - cytoML and flowutils
FlowSOM
3.4 years ago jakub.savara • 0
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0
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1.2k
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Help with FlowSOM
FlowSOM
3.6 years ago ismail.ameran • 0
1
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6
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2.1k
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Running FlowSOM in R problem
FlowSOM
updated 4.3 years ago by ▴ 10 • written 4.3 years ago by • 0
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0
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1.7k
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Error from FlowSom to Cytofast
Cytofast FlowSom CyTOF fcs files
4.4 years ago domenico.somma • 0
0
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1
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1.3k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
5.8 years ago fabrizio.benedetti.82 • 0
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0
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1.7k
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FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom consensusclusterplus
7.9 years ago Lukas Weber • 0
0
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1
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1.3k
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multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore flowsom
8.5 years ago jeremyeadler • 0
13 results • Page 1 of 1
Recent ...
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Answer: SingleR with multiple single cell references by Aaron Lun ★ 28k
> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…
Answer: Automatically install dependencies by ATpoint ★ 4.7k
The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…
Answer: To count or not to count multi-overlapping reads? by Gordon Smyth 52k
> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…
Comment: Weird p-values using DESeq2? by ATpoint ★ 4.7k
This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…
Answer: Weird p-values using DESeq2? by Wolfgang Huber ★ 13k
Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…
Votes
A: Fraction count for multi mapping reads; how to generate input file for Deseq2 fo
Comment: Weird p-values using DESeq2?
Comment: Overcoming confounding in batch effect correction
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
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