Bioconductor Galaxy

Showing : galaxy • reset

votes

replies

576

views

Conference Community Galaxy GBCC2025 Bioconductor

14 months ago Maria Doyle ▴ 110

votes

replies

1.5k

views

DESeq2 Galaxy pca

updated 2.8 years ago by swbarnes2 ★ 1.4k • written 2.8 years ago by mbxdn1 • 0

votes

1.4k

views

DESeq2 RNASeq Galaxy

updated 3.8 years ago by Michael Love 43k • written 3.8 years ago by István • 0

votes

replies

2.3k

views

ballgown StringTie galaxy rnaseq

updated 3.5 years ago by Kevin Blighe ★ 4.0k • written 5.4 years ago by lakshmi9c • 0

votes

822

views

deseq2 galaxy

updated 5.7 years ago by Michael Love 43k • written 5.7 years ago by mikelirastor • 0

vote

replies

1.8k

views

deseq2 galaxy

8.7 years ago gkuffel ▴ 10

votes

replies

1.8k

views

bioconductor next-generation sequencing galaxy

updated 9.0 years ago by Lucas Schiffer ▴ 240 • written 9.0 years ago by efraim.culfa • 0

votes

replies

4.9k

views

rnaseq galaxy deseq2

updated 9.8 years ago by Michael Love 43k • written 9.8 years ago by Marcelo Pereira ▴ 70

votes

replies

1.6k

views

DESeq2 Galaxy

updated 9.8 years ago by Michael Love 43k • written 9.8 years ago by Marcelo Pereira ▴ 70

9 results • Page 1 of 1

Recent ...

Replies

Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0

The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Votes

Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Awards • All